| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5587 |
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| Symbol | |
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| ID | 8361764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7137259 |
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| End bp | 7138134 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967731 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125215 |
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| Protein GI | 256424562 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.425806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.825086 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTGT TACAGTTTAC CATACCTGTT CCGCTGGACA AATCCATTAT TGTACAGAAA
GACGTACTGC CTTACTTCTA TCCCCATCTG CACAGACACC AGGAGATCCA GCTCACCTGG
ATACAGCAGG GTGAAGGTAC CCTGGTGGCC GACAATAATA TGCATCCGTT CCGGCCCAGT
GAGATTTATT GGCTGGGGGC TAATCAACCG CATATTTTCA AAAGCGAGGC ATCTTATTTT
CAACCCAAGA GCCGGAAAAA AATAGTGGCG CTGGTAATAT TCTTTAATCC GGACGGCGAA
CTGGCAGGCT TCTTCAATCT GCCGGAAATC AAAGTTCTGA AGAACTTTAT CCAGCAACAC
CAGTCAGGCT TTAAAGTACC TCCCGAACAT GCCACGGAGA TCTCCAGCCG TATGCTGAAG
ATCACCAACA GCTCCGGAAC CGAACAATTA TTGCAGTTTG TCGAACTGCT GAAACAGTTA
TCCGGTTGCC CGGATATTAC ACCACTGGCC TCCGGCCAGC GTGCACAGCC TGTCAGCGAA
CATGAAGGGA TCCGTATCGG GAATATCTAC AATTATATCA TGCATCATTA TGATAAACCC
ATCACCCTGG AAGACGCCGC CAAACAGGCA TGTATGACGC CGCAGGCATT CTGCCGCTTC
TTCAAAAAGC ATACGCTGCA TACCTTCGTT TCCTTCCTGA ATGAAGTAAG AATCAATGAA
GCCTGTAAAA AACTGACGGA TGGCAGTTAT GATAATATTG CTACCGTGGC GTATACCTGC
GGATTTAACA GTATCACCAA TTTTAACCGG GTATTTAAGT CTGTCACCCA GCGATCCCCC
AGTGAATATA TGAACAGTTA TTTCCAGAGT GTTTAA
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| Protein sequence | MKVLQFTIPV PLDKSIIVQK DVLPYFYPHL HRHQEIQLTW IQQGEGTLVA DNNMHPFRPS
EIYWLGANQP HIFKSEASYF QPKSRKKIVA LVIFFNPDGE LAGFFNLPEI KVLKNFIQQH
QSGFKVPPEH ATEISSRMLK ITNSSGTEQL LQFVELLKQL SGCPDITPLA SGQRAQPVSE
HEGIRIGNIY NYIMHHYDKP ITLEDAAKQA CMTPQAFCRF FKKHTLHTFV SFLNEVRINE
ACKKLTDGSY DNIATVAYTC GFNSITNFNR VFKSVTQRSP SEYMNSYFQS V
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