Gene Cpin_5585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5585 
Symbol 
ID8361762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7134554 
End bp7136002 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content53% 
IMG OID644967729 
ProductAldehyde Dehydrogenase 
Protein accessionYP_003125213 
Protein GI256424560 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.553725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.902956 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACAG ATGAAATCAT GCAGCGCGCA GCGGCTGCTT TTGAGGAGTA CAGGTATACG 
ACGGCTGTTG CCAGGGCTGC GTTCCTTGAA GCGATAGCGG CAGCTATTGA AGCACAAAGG
GAACCATTGG TTGCAGCGGC ACATGCAGAA TCCAATCTAC CGCTTCCCCG GTTAAATGGA
GAGCTCACGC GTACCACTTC GCAGTTACAG CTTTTTGCCA CGCTGATCAA AGAAGGTAGC
TGGGTAGAAG CAGTGATCGA TACGGCAAAA CCGGAGGCTA CACCGGCTAA GCCGGATATC
CGTAGAATGC TGTTGCCTGT TGGTCCGGTA GTGGTCTTTG GCGCGAGTAA TTTCCCATTT
GCTTTTTCTA CCGCAGGTGG AGATACGGCC AGCGCGTTAG CGGCCGGCGC TACTGTTGTA
ATCAAGGGAC ATCCTGCGCA TCCGCGTACC TCCCAGTTAG CGTTTGAAGC CATGCAAGCC
GCAATTAAAG AAAGCGGTAT GCCGGTATAT ACCGTACAAC ATGTGACGGG AGACGGGAAC
GCCATCGGGA AAGAATTGGT CATGCATCCG CTGGCGACAG GCGTCGGTTT TACCGGTTCT
TTCCAGGGAG GAAAAGCTTT ACTGGATTAT GCGGCACAGC GGGAAGTACC GATCCCTGTA
TTTGCAGAAA TGAGCAGCAT CAATCCTGTG GTGTTTTATC CGGATGCACT GGCTACACAA
TCGGCGCAAC TGGCGCAGAC CTTCGCTACT TCCATTACAC TGGGTATGGG GCAGTTCTGT
ACCAATCCTG GTATTCTGAT CGGACTGAAG GGAGAAACGC TGGAATTATT TATACAGCAA
CTGGGAACGG CAATAGCAGC TGTCGCCCCG CAGAAGATGC TGCATAAAGG CATCTGCGAA
GCATATGATA AAGGCCGTAC CCGTATGCTG ACAGAACCAG CCGTGACCCT CGTCAATGAA
TCAGCTGTTC CGGCAAGCAT GGAAGCCTGG CCGGCATTGG CAAGAACGAC GGCGAATGCT
TTCCTGATTA ATCCGGCTCT GAAAGAAGAG CTCTTCGGCC CTTATTCACT GATCGTTGAA
TGTACAGATA AAGCGGAGCT GATTGCGGTG CTGAAAAGTC TGCATGGACA ACTGACGACT
ACCATCGTTG GTACACCGGC AGATACCGCA CAATGGAAAG ATGTTATCAC CATACAATCG
ACCCTTGCGG GCCGTGTTAT TCTCAATAAC CCGCCTACCG GCGTGGAAGT ATGTGCAGCA
ATGGTACACG GCGGACCGTT CCCCGCTACT ACCGACCAGC GTTTTACTTC GGTGGGCACG
AGTGCTATCC GCCGCTGGGT GAGACCTGTA TGTTTTCAGA ACTTCACAGA TGATATGCTG
CCGGATGCAT TGAAGGCAGC CAATCCCCTG GGCATATGGC GCCAGGAGGA CAATCAGTTT
GTGCGATAA
 
Protein sequence
MQTDEIMQRA AAAFEEYRYT TAVARAAFLE AIAAAIEAQR EPLVAAAHAE SNLPLPRLNG 
ELTRTTSQLQ LFATLIKEGS WVEAVIDTAK PEATPAKPDI RRMLLPVGPV VVFGASNFPF
AFSTAGGDTA SALAAGATVV IKGHPAHPRT SQLAFEAMQA AIKESGMPVY TVQHVTGDGN
AIGKELVMHP LATGVGFTGS FQGGKALLDY AAQREVPIPV FAEMSSINPV VFYPDALATQ
SAQLAQTFAT SITLGMGQFC TNPGILIGLK GETLELFIQQ LGTAIAAVAP QKMLHKGICE
AYDKGRTRML TEPAVTLVNE SAVPASMEAW PALARTTANA FLINPALKEE LFGPYSLIVE
CTDKAELIAV LKSLHGQLTT TIVGTPADTA QWKDVITIQS TLAGRVILNN PPTGVEVCAA
MVHGGPFPAT TDQRFTSVGT SAIRRWVRPV CFQNFTDDML PDALKAANPL GIWRQEDNQF
VR