| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5577 |
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| Symbol | |
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| ID | 8361754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7121671 |
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| End bp | 7124784 |
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| Gene Length | 3114 bp |
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| Protein Length | 1037 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967721 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_003125205 |
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| Protein GI | 256424552 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.500475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCTT TATCTAAAAT AAGTATCACC CGCCCGGTAC TGGCCGCCGT CATGTCAGTA
CTGATCCTGC TGCTGGGTAT CGTCGGCTAC TTCTTCCTGG GTACCAGGGA ATATCCGGTA
GTCGATTCTC CGGTAGTCAC GATCACCACC GTATATCCCG GCGCCAGTGC CGACGTGATT
GCTTCACAGG TTACCAAACC ATTAGAAGAA GCAATTGCGG AAGCCAATGG TATCCGTACG
ATCAAATCCG TTTCCCGTGA ACAGGTCAGC GTCATCTCTG TCGAATTCAA CCTGAATACT
GACCTGGAAG CCGCTGCCAG TGATGTACGT GACAAAGTAT CCAAATCAAG GATGCAACTG
CCGACGGACA TTGAACCGCC TGTAGTAGAG AAGTCCGGCC CTTCCGAAGC GCTCGTGTTT
CTGATCGTGC AGAGTAAGAC GAAAAGCCTG GAAGATATCA CCGACTTTGT TAATACTAAT
ATTAAGGAAA GATTACAGTC CATTCCCGGC GTAAGATTAG TCAATGTATA TGTAGGCCGT
AAAAGGTCTA TGCGCCTGCG CATGGATCCG GTTAAAATGA GCGCTTACGG TCTGACGCCC
GCCGATATAC AACAAGCCTT ACAGCGTGAA AACGTAGAAC TACCCAGTGG CAGGATTGAA
GGGCAAAATG CAGAAGTATC CCTGCGTACA AAAGGAAGAC TGGTGACCGA AGAAGACTTT
AATAACATGA TCATCAGCCA GAAAAACGGC GCCATGATCC GTTTCAAGGA TATCGGCACA
GCGGTCATGT CTTCTAAAAA CGAGCGTACC TCCATGATTA CCTTCAGCGG ACCAACCGCT
AATTTCAGCG TAGGTACGAA TGTGAGTCCG CAGCGTGGCG CTAACTCACT CGCGATCGTA
GATGAATTCA ATAAACGTTT CGAAGAGATC AAAAAGACAG CCCCTAAAGA CTACGAGATC
ACATTAGGTA AAGACTTTAC CGAACCTGTA CGTAACTCGC TGGAAGAAGT AGAAGAATCG
CTTTTCCTGG CCTTTATGCT GGTATCCCTG ATCATCTTCA TTTTCCTGCG TGACTGGCGT
AGTACCATCA TTCCATTAGT GGCTATCCCG GTGTCTATTA TCTCTGCATT CTTCATCATG
TATGTGGCCA ACTACTCCAT CAACGTACTG ACCTTGCTGG GACTTGTACT GGCCATTGGC
TTAGTAGTAG ATGATGCGAT CGTGGTACTG GAAAATATCT ACAGCAAAGT GGAAGCAGGT
ATGACACCTG AAGAAGCGGC CATTAAAGGA TCGGATGAAA TCTTTTTTGC CGTCATCTCT
ACCACAATCA CACTGGCGAC CGTATTTCTT CCGATCCTTT TCCTGGGAGG TGTAACCGGT
CAATTGTTCC GTGAATTCGC AGTAGTTGTA TCCGGTTCCG TTATGGTCTC CGCATTCGTG
GCATTGACAT TATCGCCGAT GATGAGCGCC TATCTGCTGA AAGCACACAC CGGTCATAAC
TGGTTATACC GTAAAACAGA ACCCTATTTC ATCGCCTTCA ACAATGCCTA CGAAAGATCC
TTAAACGCGT TTCTGCGGGT ACGCTGGGTA GCGTTTATAC TACTGGCAGC GTCCTTCGGA
CTAACCTTCT GTTTACTCCC CAAACTGCCT TCTGAACTGG CGCCGCTGGA AGACCGTTCC
AGTATCGGTA TCGCCGTGAT TGCGCCGGAA GGAACGTCTT TCGAAAGTAT GGAAGCCTCC
ATGAAAGAAA TAGGTCAGTA TATTAAAGAT TCTATTCCCG ATCATAAAGA TGATATCACC
TATGCCGTTA CTGCGGGTGC ATTGGGTGAC CTGGAACAAC CGGTGAACAG TGGCTTCCAC
TGGATATTCC TGGAGAAACC GGAACACCGG AAAAGTAAAC TGACACAGGC ACAGGTTTAT
GATAAACTGG TAGCAGCATC CGGCAGGTTC CGTAATGTGT TGTTCATCCC GATTCAGTTC
CCTACCATCA GTACAGGAGA CAATACACAA CCGGTACAGT ATGTGGTACA GGCGCCCGGA
CTGAAAGAAC TGACAGACCT CATGCCGAAG CTGATGGAAG AAGTCTATAA GAGTAAAAAA
CTGGTCTTCT CTGACCCCGA TTTTAAGATC AATCGTCCGG AGGTAGGTAT CAGCATCGAC
CGTGACAGAG CCGCGCAATT AGGCATCTCT ACGGAAGAAA TTGGCCGTAC GCTGCAACTG
GCACTGAGCG GAAGGAGATA TGGGTATTTC ATTTACAACG ACAGACAGTA TGAGGTTATC
GGACAACTGG ACCGTAAGGA CCGCTCCGCA CCTACCGATC TGCGTTCCCT GAACATAAAA
ACACCAAAGG GTGAGATGGT ATCACTGGAC AATCTCGTAC AGCTGAAAGA TGCGATCAGT
CCGTCTGCCA TTTATCGTTA TGATCAGGCA TACAGTGCTA CGATCTCTGC AACACCTGCC
CCGGGTGTCA GTCTGGGGGA AGCGATCAAA GAAATGGACC AGATCACGAA AAAGGTATTG
CCCAAAGATT TCCGTACCAG TCTCGCCGGA CAAAGCCGCG ACTACGCAGA AGGCAGTTCA
AGTCTGATGT ACGCATTCCT CTTTGCCATC GTGCTGATCT ACCTGGTACT GGCCGCACAG
TTTGAAAGTC TGCGGGATCC TTTCATCATC CTGCTGACCG TCCCCATGGC ACTCGCAGGT
GCATTAATGA GTCTCTGGTT CACCGCACAG ACGGTCAATA TCTTCAGTCA GATCGGGATC
ATTATGTTGA TTGGTCTGAT TACCAAGAAC GGTATCCTGA TCGTAGAATT TGCCAACCAT
ACCAAACAGG AAGGTGCTTC TCCGTTAGAG GCAGCCAGGG CCAGTGCGGT ATCCCGGTTC
AGACCTATCC TCATGACCAC CCTCGCTATG ATCTTAGGTA CACTCCCGAT TGCGCTTTCA
CTGGGCGCGT CTTCCGGCAG CCGTAAGTCA CTGGGTATCG TGGTAGTAGG CGGATTAGTA
TTCGCAGGTA TATTGACGCT CTATGTTATC CCTGCAGTCT ATTCTTACTT CTCCGCTCAT
AAAAAACCAG CTGCACATGC AAGAAAAACA AATGAAAGTA TCGCAGCGGT ATGA
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| Protein sequence | MASLSKISIT RPVLAAVMSV LILLLGIVGY FFLGTREYPV VDSPVVTITT VYPGASADVI
ASQVTKPLEE AIAEANGIRT IKSVSREQVS VISVEFNLNT DLEAAASDVR DKVSKSRMQL
PTDIEPPVVE KSGPSEALVF LIVQSKTKSL EDITDFVNTN IKERLQSIPG VRLVNVYVGR
KRSMRLRMDP VKMSAYGLTP ADIQQALQRE NVELPSGRIE GQNAEVSLRT KGRLVTEEDF
NNMIISQKNG AMIRFKDIGT AVMSSKNERT SMITFSGPTA NFSVGTNVSP QRGANSLAIV
DEFNKRFEEI KKTAPKDYEI TLGKDFTEPV RNSLEEVEES LFLAFMLVSL IIFIFLRDWR
STIIPLVAIP VSIISAFFIM YVANYSINVL TLLGLVLAIG LVVDDAIVVL ENIYSKVEAG
MTPEEAAIKG SDEIFFAVIS TTITLATVFL PILFLGGVTG QLFREFAVVV SGSVMVSAFV
ALTLSPMMSA YLLKAHTGHN WLYRKTEPYF IAFNNAYERS LNAFLRVRWV AFILLAASFG
LTFCLLPKLP SELAPLEDRS SIGIAVIAPE GTSFESMEAS MKEIGQYIKD SIPDHKDDIT
YAVTAGALGD LEQPVNSGFH WIFLEKPEHR KSKLTQAQVY DKLVAASGRF RNVLFIPIQF
PTISTGDNTQ PVQYVVQAPG LKELTDLMPK LMEEVYKSKK LVFSDPDFKI NRPEVGISID
RDRAAQLGIS TEEIGRTLQL ALSGRRYGYF IYNDRQYEVI GQLDRKDRSA PTDLRSLNIK
TPKGEMVSLD NLVQLKDAIS PSAIYRYDQA YSATISATPA PGVSLGEAIK EMDQITKKVL
PKDFRTSLAG QSRDYAEGSS SLMYAFLFAI VLIYLVLAAQ FESLRDPFII LLTVPMALAG
ALMSLWFTAQ TVNIFSQIGI IMLIGLITKN GILIVEFANH TKQEGASPLE AARASAVSRF
RPILMTTLAM ILGTLPIALS LGASSGSRKS LGIVVVGGLV FAGILTLYVI PAVYSYFSAH
KKPAAHARKT NESIAAV
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