| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5565 |
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| Symbol | |
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| ID | 8361742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7103790 |
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| End bp | 7104170 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967709 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_003125193 |
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| Protein GI | 256424540 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00725459 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGATCCT CTTCAAAGAA AGTGCTGATC ATCGATGATG ATACCAGGAA TATATACGCA
CTGCGTATGG TATTGAAAGC CAAGGGATAC GACTGTATCA CAGCAATGGA TGCACAGACG
GGGTTACAAT TACTGGCAGA TCAGCCGGAC ATTGGTATGG TACTGATGGA CATGATGATG
CCTGAAATGG ATGGTTATGA GGCACTTGGC AGAATACGCG GAGATGCTCG TACTGCCGCC
ATACCTGTTA TTGCCGTTAC AGCACAGGCG ATGGTGGGGG ACCGTGAAAA ATGCCTGGCA
GCAGGCGCCT CCGAGTATGT TTCCAAGCCT ATAGACCAGG ATATACTGCT CGACATCCTG
AAAAATAAAT TCAATATGTG A
|
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| Protein sequence | MGSSSKKVLI IDDDTRNIYA LRMVLKAKGY DCITAMDAQT GLQLLADQPD IGMVLMDMMM
PEMDGYEALG RIRGDARTAA IPVIAVTAQA MVGDREKCLA AGASEYVSKP IDQDILLDIL
KNKFNM
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