| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5563 |
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| Symbol | |
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| ID | 8361740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7101850 |
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| End bp | 7103085 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967707 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_003125191 |
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| Protein GI | 256424538 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0103518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTACA ATCAGGAACA TATTTTCCAG CTGATACTGG AGAAATTAAG CGGCGATATC
AGCGATGAAG ACAACCGTTA CCTGGAGCAG ATGGCCCAGG TGGATCCCAA CGTCAAACGT
TGTCTTGAAG AGCTGGAAGG CGCACGCGAC GTGGCCGGCC CCGAGTTTAT GAATGACCTT
CATAACGAAC GGGCGTGGAG CAGCGTACTC TCCTTATTAC ACGCAGACAA GGAGAAAAAA
GACCCCGAAA AGAAAAATAC AATCATTATA CCTGCCGCCG TGGACGAAAC ACGGGTAGTT
TCCTTACAGA AAGATGGCAG ACCCCGTTCC CGCAACAAAT GGTGGCTGGC AGCAGCGATC
ACCTTACTGA TCGCTACCGG CGGATATTAT CTGCTGGGTG GCCGTTCAGC AGCCGTGAAG
GGTGACAGGG GAACTGAGAT CGCCGCTATT CCTGCATGGG GCGATGTACG TCTCTTACTG
GAAGAAGGAG ATACCGTACG TCTTGCTACC AATACCGCCG CCGATATCAA TACACAGAAT
GCGCTCCTGC ACCAGCGGGA TGGTATGTTG TCATTTCAGC CGGGAGACGG TGCGGGTGGC
TGGAATACAC TCTTCGTTCC TACCGGTAAA GATTACAAAG TACAATTGTC CGACGGTTCT
GTCGTACACC TGAACGCCTT TTCACGTCTC CGCTTCCCGT TCTCCTTTGA TGGCAATAAC
AGGGAAGTAT ACCTGGAGGG AGAGGCGTAT TTCGATATCG CAAAGAAAGC AGATCAACCA
TTTATTGTAC ATACTGCCGG AACTTCTGTG AAAGTGCTGG GTACATCCTT TAACGTGAAC
GCTTATAATG ACTCCCTGAT TGTTACCTCA CTGGTATCAG GAAGCGTAGT GAGCGATACG
GAGGAGAATG ACAGCCTTTA TCTGAAACCT GGTATGGCCT CAGTATACCG TAAGGGCTAC
CGCCAGCAAC AGCAAAGCTT TGACGAAGCG ATCACACTGG GCTGGAGAAA AGGAGAATAT
GCCTACTATA ATCAACCATT AGGTACGTTG GAAGCCGTTA TTTCCCACTG GTACGGCAAA
CAGTTATTAT TTGACGATCC GGCGCTGGCC AACAAAATGC TGACGGGTGT GATCGAACGT
GATCAGCCGC TTACAGATTT TTTGGAGAGC CTTGATAAAA CATCCGGTGT AACGTTCAGA
ATTACGAATG ATAAAATATA TCTTAGGACA AAATAA
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| Protein sequence | MSYNQEHIFQ LILEKLSGDI SDEDNRYLEQ MAQVDPNVKR CLEELEGARD VAGPEFMNDL
HNERAWSSVL SLLHADKEKK DPEKKNTIII PAAVDETRVV SLQKDGRPRS RNKWWLAAAI
TLLIATGGYY LLGGRSAAVK GDRGTEIAAI PAWGDVRLLL EEGDTVRLAT NTAADINTQN
ALLHQRDGML SFQPGDGAGG WNTLFVPTGK DYKVQLSDGS VVHLNAFSRL RFPFSFDGNN
REVYLEGEAY FDIAKKADQP FIVHTAGTSV KVLGTSFNVN AYNDSLIVTS LVSGSVVSDT
EENDSLYLKP GMASVYRKGY RQQQQSFDEA ITLGWRKGEY AYYNQPLGTL EAVISHWYGK
QLLFDDPALA NKMLTGVIER DQPLTDFLES LDKTSGVTFR ITNDKIYLRT K
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