| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5562 |
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| Symbol | |
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| ID | 8361739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7098555 |
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| End bp | 7101797 |
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| Gene Length | 3243 bp |
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| Protein Length | 1080 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967706 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125190 |
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| Protein GI | 256424537 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0203827 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAAGC ATGTTTGTAA GGCGATCAGG ATCCTATTGA TACTGTGCTG TCTGTTGTTT
CCAGCTACCC GAATGATAGC ACAGGGCACA ACGGATGGGG CGAGGGTTAC TATTACCGGT
AAACACATTC CACTCACTAC TGTTTTCAAA AGTATTACCC GGCAAACCGG GTATTTTTTC
GTTTTTGATA ATGCCATTAT CGACGGCAAC GAAAAGATCT CTCTCAATTA TAAAAATGCC
TCCTGGGAAG AAGTACTCAC CTATGTCTTA CAGAACAGGA ATATCAGTTG GCTGAAACAG
GGAAAACGCA TTTATCTACA GGTTGCAGAA CCAGATAAAA AGGCAGAACT GAGCAATACG
GTAGAAACGA TGGTCACTAT CCGTGGCCAT ATTACGGATA TCGGCAATCA GCCGGTACCC
GGCGCTACTA TTCTTGTAAA AGGGACTTCC CGTGGGGTCA CCACCGGGGC TAACGGAGAG
TTTGTACTGG CTGGCGTATC GCCGGGAGCC TTATTGCGTA TTTCTTCACT GGGTTACCGT
CCGATAGATA CCATATTGCG CAGCGAGCCT CTGCATGAAA TAAAGCTCGG AGATGCTGTC
AATACCCTGG ATGCGACTGT AGTGATCGGA TATGGTTCCA GTAGTCGCAG GAGATTAACG
GGAGCTGTCA GCCGGATGAC GGCGGAGCAG TTAGCCAATC AACCGGTAGC CAATGTATTA
TCCGCTTTAC AGGGGCAGAT TCCGGGCATA CAGGTGACCA GTACCAACGG ATTACCCGGT
GCGCAGATAA AACTGTTTAT CCGTGGCCGG AACTCTATTG CTGCGGGCAA TGATCCCCTC
TTCATCATTG ATGGTGTACC ATTCGATATT ACACCACTGA ATAATACAGA AGACCTGTTC
GGCGCAGCCG GACGTATCAG TCCTTTTACC AGTATCAATC CCGCCGATAT TGAAAGTATC
GACGTACTGA AAGATGCAGA TGCGACTGCC ATTTATGGGT CCAGAGGGGC CAATGGCGTT
ATATTAATCA CGACAAAAAA GGGAGAGGCG GGAGATCCCC GCTTAGACCT GAATATACGT
ACAGGTATTG GCGTCACAGC AGGACAGATG TCCCTGCTGG GGATCAAAGA TTACCTGACC
ATCAGAAGGG AGGCTTTTCT GAATGATGGT GTACAGCCGA CAGTGGCCAA TGCCCCGGAT
CTCCTGCTCT GGGATACGAC ACTGTCTACC AACTGGTTCA AAAAACTCAT GGGAGGTACA
GCGCCTGTAA CCAATGCACA GCTGGGTTTT TCGGGTGGCA GTAATTACAA TACCTTCCTT
TTGAGCGGGA ATTATTACAG AGAAGGAACC GTATTGCCGG CCGACCTGGG ATATCACCGG
GGTGGTTTTC ATCTGAGTTT TCAGCACCAT CATCCGGAGC AGCGTCTGGA AGCCGCTTTT
TCAGCGAGCT TTGTGGCAGA TAATAACCGG AGTATTGCGA ATGATATTTT CGGATTTTAT
ACGCTCCCAC CTGATTATCC TTTATACGAC AGCAGCGGTC ATTATTATTG GGGCTCTTCT
TTTGACAATC CGCTGGCATC GCTGCAGCAA CAGTCAAACA GCAAGACCAA TAATCTGTTA
AGCAACCTGG TATTGCGGTA CAGGGTATTG CCCGGGCTTA TTCTGAAAAC CAGTCTGGGG
TTGTCCGATA TACGGATGAA GCAGTTTTTT TCCTTTCCAC AGTCTACCCA ACATCCGAAT
AATGCACCTA CCAGTTTTAT CCGCGTTGCA AACAACAACC GGGAATCTTT TATTGTCGAA
CCACAGGCAG ATTACAACCT GCGTCTTGGA AAAGGTAATA TACATGCATT AATTGGCGGT
ACCTGGCAAC AAACAACCCG TAAAGGTACA CAGGCTATTG GTCAGGGATA CGCGGATGAA
GCCGTGATGG AATCCCTGGA AAGTGCAGAT ACGATTATAT ACCGGCCGGA CTCTTATGCA
CTGTACCGTT ATGTGTCTTT CTTCAGCCGT TTTACTTATG ACTGGAAAAG AAAATACCTG
TTGAATGTGA GTTACAGGCG TGATGGTTCT TCCCGTTTCG GACCGGGAAG ACAGTTTGGT
GATTTTGGCT CTGTCGGACT CGGTTGGGTA TTTACAGAAG AGTCATTCGT ACGCCGTTTT
TCCTGGCTGA GTTTTGGTAA GCTAAGAGCG AGTGGTGGTT TTACTGGTAA TGACCAGATC
GCGGACTATC AGTATATGCG TAACTACGGC ACGAACGGCA ATTATACAGG CGATAATACC
CTGGCGCCTT TACGGCTGGC AGACGACAGG TACAGCTGGG AGGCCAATAA GAAGATGGAG
GCGGCGATAG AACTGGGTTT CCTCAATGAT AAACTTTTCT TTTCGGCAGC AAAATATTGT
AACCGCAGCA GTAATCAGCT GGTAGGTTAT CAGTTGCCCG GTGTGACCGG TTTTACCAGT
TACCAGGCTA ATCTGCCTGC AGTAGTGGAG AATACCGGCT GGGAACTGGA GGTACGGACA
AATAATTTCA AACGGCAGGA TTTTAGCTGG ACGACGGCTG CGAATATTTC TTTTTTCAGC
AACAAACTCA GAAGATTCAA TAGTCTTGCT GTATCATCTT ATGCGAATGC TTTTGTAATA
GGGCAGTCGC TGAATATCAA AAGAGGTTAT CATTTTACAG GTGTAGATCC ACAGACAGGC
GTTCCCCGGT TTGAAGATGT GAATCATGAT GGTAAACTAT CCTCGCTGAA TGATTATGTG
ACGATAGCTA ACCTGGATCC GAAATTTTAT GGAGGCATAC AGAATGATCT GCACTATAAA
AATATCAGCC TTGGTTTTTT CTGGCAGTTT GTAAAGCAAG AGGGAACATT TCCTTCTGTT
CGTCCGGGGC AGTTTGCCAA CCAGTTGACA GAGAGCCTGG AGCGATGGCG TAAACCAGGA
GACGTTACGG ATATTCCCCG TGCAACGGCG ACTGCAGGTA ATACGGCATA TGATATGAGC
AGTATGTTAC CCTTGTCAAA TGCCGGGTAT CAGGATGCTT CGTATGTGCG GCTGAAGAAC
GTTTATATTT CTTATACCAT GCCTGAAGCG GTATTGAGAA AGGTGCGGCT ACAGTTGTGT
AAATTTTATC TGCAGGGGCA GAACCTGCTG ACCATCACCG GTTATAAAGG CGCTGATCCG
GAAACGCAGA TCCTGACACC TGTGTTGCGG GTTATTACCA GTGGGATTCA GTTAACATTA
TAA
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| Protein sequence | MVKHVCKAIR ILLILCCLLF PATRMIAQGT TDGARVTITG KHIPLTTVFK SITRQTGYFF
VFDNAIIDGN EKISLNYKNA SWEEVLTYVL QNRNISWLKQ GKRIYLQVAE PDKKAELSNT
VETMVTIRGH ITDIGNQPVP GATILVKGTS RGVTTGANGE FVLAGVSPGA LLRISSLGYR
PIDTILRSEP LHEIKLGDAV NTLDATVVIG YGSSSRRRLT GAVSRMTAEQ LANQPVANVL
SALQGQIPGI QVTSTNGLPG AQIKLFIRGR NSIAAGNDPL FIIDGVPFDI TPLNNTEDLF
GAAGRISPFT SINPADIESI DVLKDADATA IYGSRGANGV ILITTKKGEA GDPRLDLNIR
TGIGVTAGQM SLLGIKDYLT IRREAFLNDG VQPTVANAPD LLLWDTTLST NWFKKLMGGT
APVTNAQLGF SGGSNYNTFL LSGNYYREGT VLPADLGYHR GGFHLSFQHH HPEQRLEAAF
SASFVADNNR SIANDIFGFY TLPPDYPLYD SSGHYYWGSS FDNPLASLQQ QSNSKTNNLL
SNLVLRYRVL PGLILKTSLG LSDIRMKQFF SFPQSTQHPN NAPTSFIRVA NNNRESFIVE
PQADYNLRLG KGNIHALIGG TWQQTTRKGT QAIGQGYADE AVMESLESAD TIIYRPDSYA
LYRYVSFFSR FTYDWKRKYL LNVSYRRDGS SRFGPGRQFG DFGSVGLGWV FTEESFVRRF
SWLSFGKLRA SGGFTGNDQI ADYQYMRNYG TNGNYTGDNT LAPLRLADDR YSWEANKKME
AAIELGFLND KLFFSAAKYC NRSSNQLVGY QLPGVTGFTS YQANLPAVVE NTGWELEVRT
NNFKRQDFSW TTAANISFFS NKLRRFNSLA VSSYANAFVI GQSLNIKRGY HFTGVDPQTG
VPRFEDVNHD GKLSSLNDYV TIANLDPKFY GGIQNDLHYK NISLGFFWQF VKQEGTFPSV
RPGQFANQLT ESLERWRKPG DVTDIPRATA TAGNTAYDMS SMLPLSNAGY QDASYVRLKN
VYISYTMPEA VLRKVRLQLC KFYLQGQNLL TITGYKGADP ETQILTPVLR VITSGIQLTL
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