| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5543 |
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| Symbol | |
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| ID | 8361720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7070055 |
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| End bp | 7072580 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967687 |
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| Product | Alpha-L-fucosidase |
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| Protein accession | YP_003125171 |
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| Protein GI | 256424518 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0324078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTTATTA ATATATTTTT TTTATTCTTC ACGGATATGA AAAGAACAGG TCTCTCTTTA
ATGCTGATCA TCGCCTTAGG AGCAGGGCGA TCGCACGCAC AGCAAAGGAA TAACAACTTA
AAGCTTTGGT ATAAGGAACC GGCAATTGAA TGGTCACAGG CGCTTCCATT AGGCAACGGA
CGTGTTGGAG CGATGGTGTT TGGCGGAACA AGCGAGGAAC TGATCCAGCT GAATGAAGCT
ACTTTATGGT CGGGCGGTCC GGTCAGTAAG CAGGTGAATC CGGCGGCAGC GTCTTATTTA
CCGGCAGTAC GCGCTGCGTT ATTCAGCGAA AAGTATCATG AAGCGGATAG CCTGCTGCGT
AAAATGCAGG GCGCTTTTTC GCAGTCATTC CTGCCATTGG GTGATATACG TATACATCAG
CAATTGAAGG ATACCCTGGT GTCGCAATAT AGTCGAGACC TGGATATAGC GAATGCGAAA
TCGATTACGC GATTTGTAAG CGGCGGCATT ACCTATACAC GTGAGCTATT TATCTCTGCA
CCTGACCAGG TGATCGTGAT CAGACTACGT TCCAGCAAGA AAGGTGCGTT GCAGTTTAAA
GCCGATCCAT CCAGTCAGCT GCATTATCAG AATAGTGTTA CAGGTGCAAA GGAAATTGCA
ATGCGAGGTA AGGCGCCTTC GCAGGTAGAT CCGAGTTATA TTAATTATAA TGCCGAGCCT
ATTCAGTATG AAGCGGCAGG TAGTTGTAAG GGCATGCGTT ATGAACTGCG GATGCGGGCG
ATCAGTCCGG ATGGCACCGT GACAACTGAT GCCACCGGGA TTACTGTGAA GAATGCTACG
GAAGCGATTT TATTACTGAC CGCAGCAACC AGCTTTAATG GTTTTGATAA ATGTCCTGAC
AGTGAAGGAC TGGATGAGAA AGCGATTGCC GGCGGACAAA TGAAAAAAGC CGCTGCATTG
TCTTATGCTA ATCTGCTGCA ACGTCACGAG CAGGACTATC ATAAATATTT TAACAGGGTT
AGTCTGAATC TGTCAGGTGA TGATCAATCA GCACAGCCAA CAGATGAAAG ACTGCGGAGA
TATACTGCGG GCGGCAAAGA TCAGGCGCTG GAGAGTCTTT ATTTTCAGTT TGGCCGTTAT
CTGCTGATCT CCTGTTCCCG TACGCCATCT GCGCCAGCGA ATCTGCAGGG TATCTGGAAC
AAGGAGCTAC GTGCGCCCTG GAGTTCCAAT TACACGATCA ATATCAATAC GCAGATGAAC
TACTGGCCTG CGGAGGTCTG TAACCTGATG GAGATGCAAC AGCCGTTGTA CCAGTTGCTG
AAAGAACTGT CTGTGACAGG CGCCGCTACC GCAGGAGAGT TTTATAATAC GAGAGGATGG
GTAGCACACC ACAATACGGA TATATGGGCG ATTGCCAATC CGGTAGGCGA TAAAGGAAAA
GGTGATCCGC AGTGGGCTAA CTGGATGATG GGAGGGAACT GGTTATGTCA GTTCCTCTGG
CAACATTACT GTTATACCGG CGATGAAAAA TTCCTGAGAG ATACGGCTTA TCCGATCATG
AAATCAGCGG CGCTTTTTAG TCTCGATTTC CTGGTGAAAG ATCCTGCTTC CGGTTACCTG
GTGACTGCAC CTGCTACTTC ACCAGAGAAT AAATTCCTGC TGGCGAATGG TACACAGGAA
TCCGTTTCCA TTGCCAGCAC GATGGACATG ACGATCATCC GTGAGTTGTT CAATAACGTG
ATTAAAGCAG GAGAAGTACT GAAAGTAGAT AATGGACTGC GTGACTCTTT ACAGGTTGCT
GCGGATCGTC TTTATCCGTT TAAGATAGGA AAGGATGGCA GTTTACAGGA GTGGTATAAA
GACTGGCCTT CCGGAGAAAC AGAGCATCGC CATATTTCAC ATCTGTATGC GCTGTTCCCT
GGCGATCAGA TTTCGCCTTC CGCTACACCC GAACTGGCTA ATGCGACTAA ACGTACTTTG
GAGATCAGGG GAGACGGTGG TACCGGTTGG AGTAAAGCCT GGAAGATCAA TACCTGGGCA
AGACTGGAAG ATGGCAATCA TGCTTACAAA CTCTTACGCG AGTTGCTGAC ATTGACAGGA
AAAGGTGCTG TAGATATGCA TAATGCAGGT GGTACTTACG CGAATCTGTT TTGTGCGCAT
CCGCCTTTCC AGATAGATGG TAACTTTGGC GGTACTTCCG GTATCGCACA GATGTTACTG
AACGGACAAT CCAACATGAT CCGTTTACTG CCTGCTTTAC CGGATGCATG GGCAACAGGT
GATGTAAAGG GATTACTGGC ATATGGTGGT CATACCATCG ATATGAGCTG GAAAGAAGGT
AAGCTGGTAC GTGTAACGAT CTATGCGAAG AAGGCAGGTA CCTGCTATTT ACTGGCAAAG
AGCAGGCTGA AAGCAGGCGC CAATGCACAG TTGGCGCCGA TGAAACCAAA AGATCCGTCA
GCAGGTTATC CTTATGCGCT GAAAACAACG GCAGGAGGCG TATATACATT GCTGGCAGCA
GAATAA
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| Protein sequence | MLINIFFLFF TDMKRTGLSL MLIIALGAGR SHAQQRNNNL KLWYKEPAIE WSQALPLGNG
RVGAMVFGGT SEELIQLNEA TLWSGGPVSK QVNPAAASYL PAVRAALFSE KYHEADSLLR
KMQGAFSQSF LPLGDIRIHQ QLKDTLVSQY SRDLDIANAK SITRFVSGGI TYTRELFISA
PDQVIVIRLR SSKKGALQFK ADPSSQLHYQ NSVTGAKEIA MRGKAPSQVD PSYINYNAEP
IQYEAAGSCK GMRYELRMRA ISPDGTVTTD ATGITVKNAT EAILLLTAAT SFNGFDKCPD
SEGLDEKAIA GGQMKKAAAL SYANLLQRHE QDYHKYFNRV SLNLSGDDQS AQPTDERLRR
YTAGGKDQAL ESLYFQFGRY LLISCSRTPS APANLQGIWN KELRAPWSSN YTININTQMN
YWPAEVCNLM EMQQPLYQLL KELSVTGAAT AGEFYNTRGW VAHHNTDIWA IANPVGDKGK
GDPQWANWMM GGNWLCQFLW QHYCYTGDEK FLRDTAYPIM KSAALFSLDF LVKDPASGYL
VTAPATSPEN KFLLANGTQE SVSIASTMDM TIIRELFNNV IKAGEVLKVD NGLRDSLQVA
ADRLYPFKIG KDGSLQEWYK DWPSGETEHR HISHLYALFP GDQISPSATP ELANATKRTL
EIRGDGGTGW SKAWKINTWA RLEDGNHAYK LLRELLTLTG KGAVDMHNAG GTYANLFCAH
PPFQIDGNFG GTSGIAQMLL NGQSNMIRLL PALPDAWATG DVKGLLAYGG HTIDMSWKEG
KLVRVTIYAK KAGTCYLLAK SRLKAGANAQ LAPMKPKDPS AGYPYALKTT AGGVYTLLAA
E
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