| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5528 |
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| Symbol | |
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| ID | 8361705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7053685 |
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| End bp | 7054107 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967674 |
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| Product | protein of unknown function UPF0047 |
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| Protein accession | YP_003125158 |
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| Protein GI | 256424505 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0432] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00149] secondary thiamine-phosphate synthase enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.652918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATAT TCCAGGAATC GTTGGTATTA CAGCAAAGAA GGAGAGGATT TCACTTGATA
ACCGCAGAGG TTTTACAGGT TATTCCGCAG CTCCGGGACA TCCGGGTGGG TATGTGCCAG
GTATTCATTC AGCACACTTC GGCCTCGCTG ACGATCAACG AAAATGCCGA TCCGACAGTG
AGAAAGGATT TTGAAATGTA TTTCAGCAAA GCAGTGCCTG AAAACGATCC TGATTATGAA
CATGATGATG AAGGTCCGGA TGACATGCCT GCACATCTCA AGGCTGCGAT GTTGGGTTCG
TCTGTGATGA TACCTGTCCG CAATGGTAAC TTTGCCTTTG GCACCTGGCA GGGAATTTAT
CTCTGCGAGC ATCGTAATTA TGGCGGTAAC AGAAGACTGG TAATCACCGT CTGGGGAGAA
TAA
|
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| Protein sequence | MKIFQESLVL QQRRRGFHLI TAEVLQVIPQ LRDIRVGMCQ VFIQHTSASL TINENADPTV
RKDFEMYFSK AVPENDPDYE HDDEGPDDMP AHLKAAMLGS SVMIPVRNGN FAFGTWQGIY
LCEHRNYGGN RRLVITVWGE
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