| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5519 |
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| Symbol | |
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| ID | 8361696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7040561 |
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| End bp | 7041703 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967665 |
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| Product | glycoside hydrolase family 76 |
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| Protein accession | YP_003125149 |
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| Protein GI | 256424496 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4833] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000740708 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0122661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTAACAT ATACGACTAT TATGAAGCGT CTCACCTGTC TGCTGACGGC TACGGTTTTG
CTGATAAGCA TTTCCTGTAG CAAGAGCAAC CCACGGGGGC CGGTTAATGA AGAGCCACCT
GTGCTGCCGC CTGTATCTTT TACATCGAAA GATGCTACGG CTGCATTTAA CACGTTCAAT
CAGTACTTCT ATAGTACGAC GGACAAACTG TATTATTCCA ATACAGAAAA AAAAGATATC
GGCGCCATCT GGACACAGGC GGTGTACTGG GATCTGATCA TGGATACTTA CAAGCGTACG
GGAGATGCGG CACATCGCAG GATGATCGAT GATCTGTACC AGGGAGGTTA CAACCGTTAT
GACAAGTATA ACTGGCGTAA CAAAGTGGTA TGGTTTATTT ATGATGATAT GATGTGGTGG
ATCATTTCAC TGGCACACGC ACATCAGATT ACCGGTAACC AGGAGTATCT GACCCGTTCT
ATAGAAGGAT TCCAGTATGT ATACCAGGAG TCTTATGACA AGGAACATGG TGGTATGTGG
TGGGATTTCA ATCATACAGG TAAGAATTCC TGTATTAATT TCCCGACAGT TATTGCTGCG
ATGACTTTGT ATAATATTAC GAAGGAGACT GCATATCTTG ACAAGGCGAA AGACCTGTAT
AGCTGGTCGC TGGCGAATCT GACTGACAGT ACAACCGGCC GCGCCGCTGA TAACAATATC
AGGGGTAACA AAGGCTGGTC TGATTATACC TATAACCAGG GTACTTTCAT CGGCGCTGCG
GTGATGCTGT ATAAGGCGAC CGGTCAGCAA TCTTATCTCG ATAATGCGAA GAAAGGAGCT
GACTATACGC AGCAGAAAAT GTCTGACGCT GATGGCATTC TGCCGGCAGA GGGAGACTGG
AATGAACAGG GCGTATTAAA GGCGATCCTG GCACATTATC TGCTGACATT GGTGAAAGAC
GCCAATCAGC CGCAATATCT GCCATGGATC AGAAAGAATA TTAATATGGC ATGGGGTAAC
AGGGATGCTG CGAGGGGGAT CATGCACAGG AACTATAAGA TACCTTGTCC GACAGGGATC
GTACAGTCCT ACGAAGCCAG CAGCGCTGTT GAGTTCATGC AGGTTTGTCC ACCAGAGAAG
TAA
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| Protein sequence | MLTYTTIMKR LTCLLTATVL LISISCSKSN PRGPVNEEPP VLPPVSFTSK DATAAFNTFN
QYFYSTTDKL YYSNTEKKDI GAIWTQAVYW DLIMDTYKRT GDAAHRRMID DLYQGGYNRY
DKYNWRNKVV WFIYDDMMWW IISLAHAHQI TGNQEYLTRS IEGFQYVYQE SYDKEHGGMW
WDFNHTGKNS CINFPTVIAA MTLYNITKET AYLDKAKDLY SWSLANLTDS TTGRAADNNI
RGNKGWSDYT YNQGTFIGAA VMLYKATGQQ SYLDNAKKGA DYTQQKMSDA DGILPAEGDW
NEQGVLKAIL AHYLLTLVKD ANQPQYLPWI RKNINMAWGN RDAARGIMHR NYKIPCPTGI
VQSYEASSAV EFMQVCPPEK
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