| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5517 |
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| Symbol | |
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| ID | 8361694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7038551 |
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| End bp | 7039462 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967663 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125147 |
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| Protein GI | 256424494 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0042541 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0106671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAA AAGACAACAT AACAGAGTTC TATACCCGTC ATCAACAGGC ATATCCTCTT
TCTGGTCAGT TTCATATCTA TCGCAGAGAA GAATTCGGCT GTGATACCGT GGCCTTACCG
GTCAGCCGCT GGAACTTCTA CAAAATATCA TTGATGGTAA AAGGAGAAGG TACCATCTCC
CTCGCCGATA AAACCATCCA TTCAAAGAAC AGTACAATCA TGTTCACCAA TCCCATGATA
CCTTATGCAT GGGAACCGGC AAACGAAGAC CAGACAGGTT ATTTTTGCCT CTTTACAGAA
GACTTCGTGA CCGCTAACCT GAAACAGGAA GCACTCTCTC AATCCCCCCT GTTTAAAGCC
GGCGGCAATC ACATCTTCTT CCCCAATGAA GAAAGTATGA AACGCCTGAG CGGTTTCTTC
GAAAACATGA TCACCGAAAT GCAATCAGAC TATGCCAATA AATACGATCT TCTAAGAAGC
TATCTGCAGC TGATCATGCA CGAAGCCATC AAGATGGATC CGCCGGATAC TTATTACCCA
CCGGTAAACG CTTCCGAAAG GATCACAACG CTCTTCCTCC AATTACTTGA ACAGCAGTTT
CCCATCGAAG CACCCCACGA GACAATCCCA CTGAAAACAG CCAAAGAATT TGCCGCACAA
CTCAACATAC ATACCAACAC CCTCAACAGG GCGCTGAAAG AAAGTACAGG CAAAACTACC
ACCGACCTGA TCGCAGCACG TCTTATACAG GAAGCAAAAG CCCTCTTACA CGCTAACCGC
TGGGATATCG CCGAAATAGG ATATACCCTC GGATTTGAAC ATGCCTCTAA CTTTAACATC
TTCTTTAAAA AACATACCTC ACAGACACCG CTCCATTTCA GGAAAGAAAA TGACATTGTT
GCTATTTCAT AG
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| Protein sequence | MKAKDNITEF YTRHQQAYPL SGQFHIYRRE EFGCDTVALP VSRWNFYKIS LMVKGEGTIS
LADKTIHSKN STIMFTNPMI PYAWEPANED QTGYFCLFTE DFVTANLKQE ALSQSPLFKA
GGNHIFFPNE ESMKRLSGFF ENMITEMQSD YANKYDLLRS YLQLIMHEAI KMDPPDTYYP
PVNASERITT LFLQLLEQQF PIEAPHETIP LKTAKEFAAQ LNIHTNTLNR ALKESTGKTT
TDLIAARLIQ EAKALLHANR WDIAEIGYTL GFEHASNFNI FFKKHTSQTP LHFRKENDIV
AIS
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