| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5516 |
|---|
| Symbol | |
|---|
| ID | 8361693 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7037536 |
|---|
| End bp | 7038540 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644967662 |
|---|
| Product | Alcohol dehydrogenase zinc-binding domain protein |
|---|
| Protein accession | YP_003125146 |
|---|
| Protein GI | 256424493 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0020682 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.0527856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCAA TAGTCCTGAA ACAGCTCGGC AGCGTCGATA ATTTCGCGTT GGCAGATACC
GATCTCCCGC ATATCAACGA CAATGAAGTC CTCATAAAAA TCTCGTCCAC CGCCTTCAAT
CCCATCGACT ACCAGATGCG GTCCGGCGCT AACGAAAGCA AACGTATACA CTCGCCCATA
TTAGGCAGGG AATTCTCCGG CGTCATTACC GCCAAAGGAA GATCTGTCAG AAACTTTGAC
ATCGGCGACG ATGTTTTCTG CGCTTCTGGC AGTATGGGTA CCAATGGTAC CTATGCAGAA
TATATCGGAG TACCGCAACA GATCCTCGCT AAGAAACCCG CCAATATCAG CTTCGACCAG
GCAGCCGCCA TGCCGATCAG CGCACTGACC GCCTTACAGT GCTGTAACCG GCTGAAGATA
TCTACGGAAG AATCCGTGTT CATCAGCGGT GGCGCAGGTG GCGTCGGACT GGTACTGATC
AAACTCCTCC TTTCACAGGG CATCAGTAAG ATAGTCACTA CCGCCGGTAA TGAAGATAGC
AGACAACAAT TGCTCAACGC CGGACTTTCC GCCAGACAAA TCACCGATTA TAAAGCAGAT
AACGTCATCC CGGCGATCAT ACAGGCTAAT AACAACCAGC TGTTCGACTA TAGCATCGAC
CTCGTCGGCC GTAAAATGTC TGAATTGTGC AGCAATCTCG TAAGACTCAA CGGCACCTAT
GTGGATGTGA CCAACTTCGC CACCGAAGAA GCCAGGGAAA ACCTCTTTAA TATCGGCGCA
GTAGTCATGA ACATTTCCAA TTATGCTTAT AGTCTGAAAG GCAACTTCTC CTATTACGGC
GAACTGCTCG AACGGGTAAG ATCATTGGTA GAAAAAGGTA TTATCACACC TTCACCTGTC
AACGTACTCG GCGACTTCAG CGTAGACACC GTCAGGAAAG CACATACCAT GCTGGAAAAC
AATGAAACCC GTGGCCATAA ACTGATCATG CGTATCAGCG AATAA
|
|---|
| Protein sequence | MKAIVLKQLG SVDNFALADT DLPHINDNEV LIKISSTAFN PIDYQMRSGA NESKRIHSPI
LGREFSGVIT AKGRSVRNFD IGDDVFCASG SMGTNGTYAE YIGVPQQILA KKPANISFDQ
AAAMPISALT ALQCCNRLKI STEESVFISG GAGGVGLVLI KLLLSQGISK IVTTAGNEDS
RQQLLNAGLS ARQITDYKAD NVIPAIIQAN NNQLFDYSID LVGRKMSELC SNLVRLNGTY
VDVTNFATEE ARENLFNIGA VVMNISNYAY SLKGNFSYYG ELLERVRSLV EKGIITPSPV
NVLGDFSVDT VRKAHTMLEN NETRGHKLIM RISE
|
|---|
| |