Gene Cpin_5513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5513 
Symbol 
ID8361690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand- 
Start bp7034528 
End bp7035535 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content47% 
IMG OID644967659 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_003125143 
Protein GI256424490 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.037771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG CTATTAATGG ATTCGGACGT ATCGGCAGAA TGACACTCAG AGCGTTACAG 
GACAAAAAAG GAGTGGAGGT AGTGGCTATT AATGACCTTA CTGAGATCGG GTTGCTCGCG 
CACCTGCTGA AATATGATAC TTCACATGGT AAGTTTCCCG GTACTGTTAC ACATGATGAT 
AAACACCTTG TTGTAAACGG GAAAAAGATC CTTTTACTGA ATGAAAGATC ACCTGAGAAA 
CTGCCCTGGG GCGAACTGGG TATAGACGTT GTGATTGAGT CTACCGGTCG TTTTACACAG 
AAAGAGCTTG CACAGCAGCA TATTACTGCA GGAGCAGGCA GGGTATTGAT CACTGCGCCG 
GCAACAGGTA ATGTGAAGAC GATTGTCGCA GGTGTGAATG ATGACCTGAT CACGGATGAA 
GATGAGATCC TGTCTACTGC ATCCTGTACG ACGAACTGTA TCGCGCCGGT ATTATACCTG 
CTGGATAAAG AGTATGGTAT TGCTTCCGGT TATATGAGTA CCGTACATGC ATTTACCATG 
GACCAGATGT TACAGGATGG ACCGCATAAA GATTACAGAA GAGCACGCGC AGCGACGCAG 
TCAATTATAC CAACAACTAC TGGTGCTGCA AAGGCGATCG GAGATGTATT GCCTGCACTG 
AAAGGTAAGA TGGATGGATT CTCTTATCGT GTACCGGTGA TTGACGGTTC TATTGCAGAT 
ATGTCACTGA ACCTGGTAAA ACCTGCATCC GCTGCAGAGA TCAACGCGCT GTTCAAACAA 
CATGCAGACA CGAATCTGAA AGGTGTACTG GAATATACAG AAGAACCGCT GGTATCAGCT 
GACATTCTGG GAAATACCCA TTCTTCTATC GTAGATGCGA GTCTGACACG TACGATCGGC 
AACCTGGTGA AGGTAGTGGC CTGGTATGAT AACGAAGTGG GCATCTCCAA CAGGATTGCA 
GAACTGACTG TACAGATGGC ACAACGGCTG ACGGCTGCGC AGGCATAA
 
Protein sequence
MKVAINGFGR IGRMTLRALQ DKKGVEVVAI NDLTEIGLLA HLLKYDTSHG KFPGTVTHDD 
KHLVVNGKKI LLLNERSPEK LPWGELGIDV VIESTGRFTQ KELAQQHITA GAGRVLITAP 
ATGNVKTIVA GVNDDLITDE DEILSTASCT TNCIAPVLYL LDKEYGIASG YMSTVHAFTM 
DQMLQDGPHK DYRRARAATQ SIIPTTTGAA KAIGDVLPAL KGKMDGFSYR VPVIDGSIAD 
MSLNLVKPAS AAEINALFKQ HADTNLKGVL EYTEEPLVSA DILGNTHSSI VDASLTRTIG 
NLVKVVAWYD NEVGISNRIA ELTVQMAQRL TAAQA