| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5500 |
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| Symbol | |
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| ID | 8361677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7014617 |
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| End bp | 7015189 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967646 |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003125130 |
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| Protein GI | 256424477 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.161362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000153945 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCACGGA ATAAAGCATT TGATCCTGAG GAAAAGCTGG AAAAAGCGAG GGATCTCTTC
TGGGAGAAGG GATACAACGC GACATCCATG CAAGACCTCT GTGAGGAAAT GAAACTGAAC
CGGGCCAGTA TATATGATAC TTACGGTGAC AAATACGCCC TCTTTCAACA GTGTCTGCAG
AACTACGCGA AGGAGAAACT ATTTGATTAC AAACAATGCT GTGAGAAGGT ATCACCACTT
TCAGCGATAG ATAGTATCAT ACGAAGAGCG GTCCACAACA GGAAAGAAGG GAAGTCCTGC
CTCATGGTAA AGACATCCTT TGAACTGGCT TCAATGGATG AAGGCATAAG ACACATTGTA
CAGGAACAGG CAAGACAAAG CATCAGCGTA TTACAGGAAC TTTTGGAGAA AGCACAAAAG
ATGAACGAAA TACCAGCAGA AAAGGATCCG GCTACACTAG CACAGTTCCT ATACGCAAGC
TTCAGTTCGA TCTGGTTGAT GGACGTATTA TTCGGTGATA AAGCAATGTT GGACAGCATG
GCAGACCATA TATTGTATAG CATCAGGCAT TGA
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| Protein sequence | MARNKAFDPE EKLEKARDLF WEKGYNATSM QDLCEEMKLN RASIYDTYGD KYALFQQCLQ
NYAKEKLFDY KQCCEKVSPL SAIDSIIRRA VHNRKEGKSC LMVKTSFELA SMDEGIRHIV
QEQARQSISV LQELLEKAQK MNEIPAEKDP ATLAQFLYAS FSSIWLMDVL FGDKAMLDSM
ADHILYSIRH
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