| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5498 |
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| Symbol | |
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| ID | 8361675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7012193 |
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| End bp | 7013563 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967644 |
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| Product | DNA polymerase III, epsilon subunit |
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| Protein accession | YP_003125128 |
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| Protein GI | 256424475 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
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| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.228182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000256581 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTATGCAA TAGTTGATAT AGAAACTACA GGTGGCCATG CCAGTGCAAA CGGCATTACG
GAAATAGCCA TTTATATTTA TGACGGACGG AATATTGTAC AGCAATACGA AACGCTGATT
AATCCGGGTG TACCCATTCC CCGATATATT CAATCCCTTA CCGGTATTAC GGACGAGATG
GTAGCAAACG CACCGGCCTT TGATGAAGTA GCCGGCGATA TCTTCGCCCT GTTACATGAT
AAGATCTTCG TAGCACACAA CGTTAATTTC GATTATTCCT TTATTCAATA TCATCTTGCC
CAGGCTGGAT ATCAGTTACG CACTAAAAAA CTGTGTACGG TAAGGCTTGG CCGTAAGATC
ATTCCGGGAC TGCCTTCTTA CAGTCTGGGT AATCTGTGTA AATCACTGGA AATCTCCGTT
ACACAGCGTC ACCGCGCTGC GGGAGATGCA GCAGCAACGG TAAAACTGTT TGGCCTGTTA
TTACAGCAGG ATACTGGTAA GGCCATTGCC CATGCTTTGT CCACCCACTC CAAAGAACAG
TTCCTGCCAC CGAACCTGCC ACCTGAACAG GTAACGGCAT TACCGGGTAC TCCGGGTGTC
TATTATTTCC ATGATCAGAA AGGAAAAGTG GTGTATGTAG GGAAGGCGAA GAATATCCGG
AAACGTGTCA ATAGTCATTT TACGGGTAAC AGTGCCGGCA GGAAAAGACA GGAGTTTCTT
CGTAATATAT ACAGTATTTC GCACGAAGTG ACGGGCACAG AGCTGATGGC GCATATACTG
GAAAGTGTGG AGATCAAACG ACTGTGGCCG GTTTATAACT ATTCGCAGAA ATATATAGAA
TTCAAATACG GCTTTTATTG TTTTGAAGAC CAGGAAGGCT ATCTGCGTCT GGTCATCGAG
AAACGCCGTA AATATTCCGC CCCGTTGCAC TCTTTTCCGT TACTGGTGCA GGGGCATCAG
ATGTTACGGG GCCTGATCAG GGAATTTGAT CTTTGTCCCC GCCTGTGCTT CTTACAAAAA
GGGCAGGGCG CCTGTTCACC GATCCCCGAT CATACCTGCC GGGGCGCCTG TGAGAAAAAA
GAAACGTCCG AAACCTACAA TCTCCGGGTA AAAGCTGCCA TTATCCATAT GCAGCAACAG
CAGCCGACAT TCGCCATTAT TGGTATGGGA CGCGATGCGC AGGAGCAGAG TTGCATCCTG
ATGGAGAAAG GACGTTTCTA CGGAATGGGG TATATTCCCC GTGATACCGC TATCACAGAA
GGGCCGCAGT GCAAGGAATG GTTGACACAG TATCCTGAAA ATGAATATAT TCTGAATCTC
ATTCACCAGC ATGCCGGCGC GCATGATCAG GAACTGCTGA AGTTTTCTTA G
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| Protein sequence | MYAIVDIETT GGHASANGIT EIAIYIYDGR NIVQQYETLI NPGVPIPRYI QSLTGITDEM
VANAPAFDEV AGDIFALLHD KIFVAHNVNF DYSFIQYHLA QAGYQLRTKK LCTVRLGRKI
IPGLPSYSLG NLCKSLEISV TQRHRAAGDA AATVKLFGLL LQQDTGKAIA HALSTHSKEQ
FLPPNLPPEQ VTALPGTPGV YYFHDQKGKV VYVGKAKNIR KRVNSHFTGN SAGRKRQEFL
RNIYSISHEV TGTELMAHIL ESVEIKRLWP VYNYSQKYIE FKYGFYCFED QEGYLRLVIE
KRRKYSAPLH SFPLLVQGHQ MLRGLIREFD LCPRLCFLQK GQGACSPIPD HTCRGACEKK
ETSETYNLRV KAAIIHMQQQ QPTFAIIGMG RDAQEQSCIL MEKGRFYGMG YIPRDTAITE
GPQCKEWLTQ YPENEYILNL IHQHAGAHDQ ELLKFS
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