Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5493 |
Symbol | |
ID | 8361670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7005571 |
End bp | 7006374 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644967639 |
Product | hypothetical protein |
Protein accession | YP_003125123 |
Protein GI | 256424470 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0264977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAACCT CCCATAAGAC CCTTTACTAT AAGAACAGTG CGATATTTAA CACAATAGGG TACATCATGG TGATCGTTGT TAATCTGCTG GCCAACCTGA ACGTCATCAA CAACAGGAGC ACCGGCGACG TATCAGATAA ATACGATAAC CTCTTTGTAC CTGCTGGTCT TACATTCGCC ATCTGGGGGC TGATTTACCT CACTTTACTG GGATTCATCG TTTATCAGTT ATGGCTGACA TTTTCCAATG GTCGTACGGA AGAACTGGAG CGCTTCATGG AACGCCTGCG CGGCTGGTGG CTGATCAGCT GTATGGCTAA TTCCTGCTGG CTTTTTGCCT GGCATTATGA GCTGCTTCCG CTGTCCGTAC TACTTATGTT AGCATTACTG GTATGCCTGC TGGCCATCCA CCTTAATTTC AACATCTCCC TCCCCCGCTC TGCCGGCAAG ATCGAGAAAC TGCTCGTACA CCTGCCCTTC AGTCTTTACC TGGGCTGGAT CTGTGTGGCG ACGATCGCGA ATATTGCCGC CTTTATGGTC TATCTCGGCT GGAATGGCAT GAGTGTGCCG GGGACTATTT TTCTCATTCT GTTATGTACC ATCGGCTCAA CGTTGCTGAT TATACGCAGA CATAACATTA TCGTAGGCCT GGTGGCACTC TGGGCTCTTT ATGGTATCAT TGTAAAACGA CAGACTGCCG GTGGCGCAGC CGAAATACCG ATTACCTGCG CATGTATCGG AGCCATGCTC ATTATCACCG TCAGCAGCGC ATGGCGGCTG ATCACCAACC GTAGATTGTC ATAA
|
Protein sequence | MTTSHKTLYY KNSAIFNTIG YIMVIVVNLL ANLNVINNRS TGDVSDKYDN LFVPAGLTFA IWGLIYLTLL GFIVYQLWLT FSNGRTEELE RFMERLRGWW LISCMANSCW LFAWHYELLP LSVLLMLALL VCLLAIHLNF NISLPRSAGK IEKLLVHLPF SLYLGWICVA TIANIAAFMV YLGWNGMSVP GTIFLILLCT IGSTLLIIRR HNIIVGLVAL WALYGIIVKR QTAGGAAEIP ITCACIGAML IITVSSAWRL ITNRRLS
|
| |