Gene Cpin_5493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5493 
Symbol 
ID8361670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7005571 
End bp7006374 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content49% 
IMG OID644967639 
Producthypothetical protein 
Protein accessionYP_003125123 
Protein GI256424470 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0264977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT CCCATAAGAC CCTTTACTAT AAGAACAGTG CGATATTTAA CACAATAGGG 
TACATCATGG TGATCGTTGT TAATCTGCTG GCCAACCTGA ACGTCATCAA CAACAGGAGC
ACCGGCGACG TATCAGATAA ATACGATAAC CTCTTTGTAC CTGCTGGTCT TACATTCGCC
ATCTGGGGGC TGATTTACCT CACTTTACTG GGATTCATCG TTTATCAGTT ATGGCTGACA
TTTTCCAATG GTCGTACGGA AGAACTGGAG CGCTTCATGG AACGCCTGCG CGGCTGGTGG
CTGATCAGCT GTATGGCTAA TTCCTGCTGG CTTTTTGCCT GGCATTATGA GCTGCTTCCG
CTGTCCGTAC TACTTATGTT AGCATTACTG GTATGCCTGC TGGCCATCCA CCTTAATTTC
AACATCTCCC TCCCCCGCTC TGCCGGCAAG ATCGAGAAAC TGCTCGTACA CCTGCCCTTC
AGTCTTTACC TGGGCTGGAT CTGTGTGGCG ACGATCGCGA ATATTGCCGC CTTTATGGTC
TATCTCGGCT GGAATGGCAT GAGTGTGCCG GGGACTATTT TTCTCATTCT GTTATGTACC
ATCGGCTCAA CGTTGCTGAT TATACGCAGA CATAACATTA TCGTAGGCCT GGTGGCACTC
TGGGCTCTTT ATGGTATCAT TGTAAAACGA CAGACTGCCG GTGGCGCAGC CGAAATACCG
ATTACCTGCG CATGTATCGG AGCCATGCTC ATTATCACCG TCAGCAGCGC ATGGCGGCTG
ATCACCAACC GTAGATTGTC ATAA
 
Protein sequence
MTTSHKTLYY KNSAIFNTIG YIMVIVVNLL ANLNVINNRS TGDVSDKYDN LFVPAGLTFA 
IWGLIYLTLL GFIVYQLWLT FSNGRTEELE RFMERLRGWW LISCMANSCW LFAWHYELLP
LSVLLMLALL VCLLAIHLNF NISLPRSAGK IEKLLVHLPF SLYLGWICVA TIANIAAFMV
YLGWNGMSVP GTIFLILLCT IGSTLLIIRR HNIIVGLVAL WALYGIIVKR QTAGGAAEIP
ITCACIGAML IITVSSAWRL ITNRRLS