Gene Cpin_5483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5483 
Symbol 
ID8361660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6992648 
End bp6992962 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content49% 
IMG OID644967629 
Producthypothetical protein 
Protein accessionYP_003125113 
Protein GI256424460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.549887 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0233834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGA CAAAGTTTGG CCTATCGGCA CTTGTCGCCA TGGTAATTGG AGCAATGGCC 
TTCAATTCCT TTGACGGGGG AACCATCAGT GGCAAAGTGA CGCCGGTAGA CGGAGCAACG
GAAGTCTGGG CCATTTCAGG CATGGATACG TTGAAAGCTC CAGTCACCGA CGGCGCTTTT
TCAGTACAGT CTGCTAAGGC AGGCTCCTAT ACCGTGATTA TCGACGCTAA AGATCCTTAT
AAAGACGCCA CCCTGAAAGA CGTGAAAGTC GAAGACGGCA AAGTAACAGA CCTGGGTGAA
ATAAAGCTGG ATTAA
 
Protein sequence
MKTTKFGLSA LVAMVIGAMA FNSFDGGTIS GKVTPVDGAT EVWAISGMDT LKAPVTDGAF 
SVQSAKAGSY TVIIDAKDPY KDATLKDVKV EDGKVTDLGE IKLD