| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5478 |
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| Symbol | |
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| ID | 8361655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6987059 |
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| End bp | 6988765 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967624 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_003125108 |
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| Protein GI | 256424455 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0650513 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAG CAGATTGGAT TGTACTGGTC GTCACACTGG TTGGAATTGT TTTATATGGC
ATCTGGAAAA GTCGCGGACA ACGCGACATG CAGGGATATT TTCTCGACAA CCAGTCTATG
CCCTGGTACA TTGTATTATT ATCTATTATC GGTACACAGG CAAGTGCTGT GACCTTCCTT
TCTGCGCCCG GTCAGGCTTA TACTGACGGA ATGCGTTTCG TGCAATATTA CTTTGGTTTG
CCTTTGGCCA TGGTGGTGCT GTGTATCACC TTTGTACCCA TCTTTCATAA GCTGAAAGTA
TTCACGGCTT ACGAATATCT CGAACAGCGT TTTGATCTGA AAACCCGTAC GCTCACCTCC
GCATTATTCC TGGTGCAGCG TGCGCTTTCT ACAGGGATCA GTATCTATGC GCCTTCTATT
ATATTATCCT CTCTCCTGGG CTGGAATATT TATCTGACAA ATATTATCAT GGGCGGACTG
CTGATCATTT ACACTGTTTC CGGAGGAACC AGGGCGGTGA GTTATACGCA GACGTTCCAG
CTGGTGATCA TATTCGCAGC GATGTTCCTG GCAGGGTGGA TGGTTGTGCA CCTATTGCCG
GCTGATATTG GCTTTAAAGA AGCCTTACAG GTATCCGGGA AGATGGATAA ACTGAATGTG
ATCGTAACAG ATTTTGACTG GAAAGACCGG TATAATATCT GGAGCGGATT GATCGGCGGT
TTCTTCCTGG CCTTGTCTTA TTTCGGAACA GACCAGTCAC AGGTAGGGCG TTATCTCACC
GCACGGTCTG TGACAGAAAG TCGTCTGGGC CTGTTAATGA ATGGCCTGGT AAAAGTGCCT
ATGCAGTTCC TGATACTGCT GATTGGAGCG ATGGTGTTTG TGTTTTACCT GTATTTCAGG
GCGCCGGTGT TCTTTAACCA GGCACAGATA AAGAAGGTAT ATAACTCGGA AGAAGGTGTT
GCTTTCAAGG CGGTGGAGGA TAAATATAAA CAACTTGCGA CGATCAAGGA GCAGCAGGTA
AGAGAAATGG CAGCTGCCAT CAAAACCGGT GATGAACAGG TGATTGCAGC GAAGAAAGCG
GCTTTGAAAG AGACCGATGT ACGCTCAACG GCCACCCGTG AGGAAGCGAT TGCTTTGATT
AAAAAGGCAG ATCCGGCGGC GGATACGAAT GATACGAACT ATATTTTCCT GCATTTTGTG
GTGAACAATC TGCCTAAAGG ACTGGTAGGA TTGCTGATTG CTATTATTTT CCTGGCAGCA
TGGGGCAGTA TTGCGGCGGC ATTGAACTCG CTGGCTTCTA CTACCGTGAT AGATATTTAT
CAGCGGATGT TTAAGAAAGA GGAGACGGAT GCACATTATT TGTCCGTGTC CCGATGGTGG
ACGGTATTCT GGGGGCTTTT CTGTATTGTG GTGGCACAGT TTGCGAGTCA GCTGGGTAGT
TTGATAGAGG CGGTGAATAT CCTGGGCTCA TTGTTCTATG GTGTGATCCT CGGTATTTTC
CTGGTGGCAT TTTACTGTAA GCGGATTGGC GGTAGCGCTA CATTCTGGGC GGCGATTGTT
TCAGAGATAG GAGTGATTGT GGTCTATCTG CTGAATATAG TGTCTTTCCT CTGGTTAAAT
GCGATCGGCT GTTTCCTGGT GATTATTATC GCGGCCTTGT TCCAGTTGAT AGCGGGGAAG
AGGGAAGAAT TAGGAATTAG GAATTAG
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| Protein sequence | MSVADWIVLV VTLVGIVLYG IWKSRGQRDM QGYFLDNQSM PWYIVLLSII GTQASAVTFL
SAPGQAYTDG MRFVQYYFGL PLAMVVLCIT FVPIFHKLKV FTAYEYLEQR FDLKTRTLTS
ALFLVQRALS TGISIYAPSI ILSSLLGWNI YLTNIIMGGL LIIYTVSGGT RAVSYTQTFQ
LVIIFAAMFL AGWMVVHLLP ADIGFKEALQ VSGKMDKLNV IVTDFDWKDR YNIWSGLIGG
FFLALSYFGT DQSQVGRYLT ARSVTESRLG LLMNGLVKVP MQFLILLIGA MVFVFYLYFR
APVFFNQAQI KKVYNSEEGV AFKAVEDKYK QLATIKEQQV REMAAAIKTG DEQVIAAKKA
ALKETDVRST ATREEAIALI KKADPAADTN DTNYIFLHFV VNNLPKGLVG LLIAIIFLAA
WGSIAAALNS LASTTVIDIY QRMFKKEETD AHYLSVSRWW TVFWGLFCIV VAQFASQLGS
LIEAVNILGS LFYGVILGIF LVAFYCKRIG GSATFWAAIV SEIGVIVVYL LNIVSFLWLN
AIGCFLVIII AALFQLIAGK REELGIRN
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