| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5470 |
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| Symbol | |
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| ID | 8361647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6979376 |
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| End bp | 6980326 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644967616 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_003125100 |
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| Protein GI | 256424447 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.602612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGAC GGCCTTTTGT ATTTTTAGCC CTCTTCTTTC TTATCTTGCC GCTCATGTGG
GACGCTTATC TCAAAGGATT CAGGTCATAT CTTCAGCTGG AACGTTCACT TTCCGCCAAC
TCCATCGAGG CTTATCTCCG CGATGTAGAA AAGCTGGTCC AGTACCTGCA ATCCGTTAAT
ATACAACCCC CTCCCGACCA GGTATCACTC TCCGATCTGC AATCCTGCGT ACGCTGGATA
GCCACCCTGG GCATGACTGC CACCTCCCAG GCCCGCATTA TTTCTGGAAT CAAGGCATTT
TACCGCTACC TCGCACTGGA AGATGTCGTC CGCCAGGACC CCACTATCCT GCTGGAAGCC
CCTAAAACCA AAAGACAGTT GCCCGATGTA CTCAGTTTTG AGGAAATAGA GCAGATTATC
GGACAAATAA AGGCTGGTAC GCCTGAAGGA CAAAGAAACC GGGCCATCCT GGAAACAATG
TACAGCTGTG GACTCCGCGT CAGCGAAGTG ACCAATCTAC AAATCTCCCA GCTCCATTTT
GACGCCGGCT TCATCCGGGT GGTCGGTAAG GGTGATAAGG AAAGATTAGT CCCTATCGGA
AGCGACGCCG TGAAATACAT TAATATATAT AAGGATGAGG TCAGGGTCCA TGTTCCTGTC
AAAAAAGGAC AGGAAGACAT CCTTTTCCTG AACCGCCGGG GCAGCGCGCT GACCCGTGTC
ATGATATTCC TTGTCATTAA AGAACTGACT GCCGCCGCTG GTATTGACAA ACAGGTTTCC
CCCCATACCT TCCGGCACTC TTTTGCGACT CACCTGGTAG AAGGCGGAGC AGATCTCCGG
GCCGTTCAGG AAATGCTTGG CCATGAGAGT ATTACCACCA CGGAGATCTA TACACACCTT
GACAGGGAGT ATCTTAGAGA TACCTTACAG CGGTTTCACC CCCGGTTTTA G
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| Protein sequence | MAGRPFVFLA LFFLILPLMW DAYLKGFRSY LQLERSLSAN SIEAYLRDVE KLVQYLQSVN
IQPPPDQVSL SDLQSCVRWI ATLGMTATSQ ARIISGIKAF YRYLALEDVV RQDPTILLEA
PKTKRQLPDV LSFEEIEQII GQIKAGTPEG QRNRAILETM YSCGLRVSEV TNLQISQLHF
DAGFIRVVGK GDKERLVPIG SDAVKYINIY KDEVRVHVPV KKGQEDILFL NRRGSALTRV
MIFLVIKELT AAAGIDKQVS PHTFRHSFAT HLVEGGADLR AVQEMLGHES ITTTEIYTHL
DREYLRDTLQ RFHPRF
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