Gene Cpin_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5469 
Symbol 
ID8361646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6978903 
End bp6979322 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content45% 
IMG OID644967615 
ProductNucleoside-diphosphate kinase 
Protein accessionYP_003125099 
Protein GI256424446 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.628942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAACA ACAGAACTTT TACAATGATT AAGCCGGATG CCGTAGAAAA CGGTCATATC 
GGTGGCATTC TGAACAAAAT TAACGCGGCT GGTTTCCGTA TCGTAGCAAT GAAAATGACC
CGTCTTTCTT CTCAGAAAGC TGGCGAATTC TATGCTGTGC ATAAAGAAAG ACCTTTCTAC
GGTGAACTGG TTGAATTCAT GAGCAGTGGT CATATCGTGG CTGCTATCCT GGAAAAAGAC
AACGCCGTTG AAGATTTCCG TAAACTGATC GGTGCTACCA ACCCTGCTAA TGCAGAAGAA
GGTACTATCC GTAAAGAATA CGCTGAATCT ATCGGTCGTA ACGCGGTTCA CGGTTCTGAT
TCTGACGAGA ACGCAGCAAT CGAAGGCGAT TTCTTCTTCT CCGGTCTGGA AAAATTCTAA
 
Protein sequence
MANNRTFTMI KPDAVENGHI GGILNKINAA GFRIVAMKMT RLSSQKAGEF YAVHKERPFY 
GELVEFMSSG HIVAAILEKD NAVEDFRKLI GATNPANAEE GTIRKEYAES IGRNAVHGSD
SDENAAIEGD FFFSGLEKF