Gene Cpin_5465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5465 
Symbol 
ID8361642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6974814 
End bp6975674 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content47% 
IMG OID644967611 
Productdihydropteroate synthase 
Protein accessionYP_003125095 
Protein GI256424442 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.128045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTA TGGAAGGGAA GAACGGCGAA TATACCACCA TCAACTGTCA GGGCACTTTG 
CTGGATTTGT CCAAACCAGT GGTGATGGGT ATCATCAACA TCACGGAAGA CTCATTTTTT
GCCGGCAGCA GAACGCAGCA TATTGATCTT ATCCTGCAAA GAGCAGCACA ACTATTGAAA
GAAGGCGCTC AGATCCTGGA TATCGGGGCA CAGAGTACCC GTCCGGGTTC TGTCTCCGTC
GGACCCGATA TTGAACTGGA ACGCCTGCTA CCGGCAGTAC GTACATTGAA AGAACATTTT
CCACAGGCCA TCCTGTCCAT CGACACTTAC TATGCGAATG TAGCTGAACA GACTGTCAAT
GCGGGCGCAG CCATCATTAA TGATATCAGT GCAGGTGATC TGGATGCGGA AATGATACCT
ACCGCCGGCA GACTGGGAGT ACCATATATC GCCATGCACA TGCAGGGTAC GCCTACTGAT
ATGCAGCAAC ACCCGCATTA TGAAGATGTG ACACTGGAAG TACTGGATTA TTTCGTACGC
AAACGCGCAC AATGTCTGGA AGCTGGTATC AAAGATATTA TCATCGATCC GGGTTTCGGT
TTTGGTAAAA CCATTGCACA CAATTATACA CTACTCAAAA AACTCAATGT TTTTCATATG
CTGGAATGCC CGCTGCTGGT AGGTATTTCA AGGAAATCCA TGATCTATAA ACTATTGGAG
ACCACACCTG CGGAAGCACT GAATGGTACA ACGATACTGC ATACACTTGC GTTGCAGCAG
GGAGCGCATA TCCTGCGTGT ACACGACGTC AAAGCCGCCG TGGAAGCGGT TAAAATCACA
CAGTATATGA ATAGGTTATA G
 
Protein sequence
MDTMEGKNGE YTTINCQGTL LDLSKPVVMG IINITEDSFF AGSRTQHIDL ILQRAAQLLK 
EGAQILDIGA QSTRPGSVSV GPDIELERLL PAVRTLKEHF PQAILSIDTY YANVAEQTVN
AGAAIINDIS AGDLDAEMIP TAGRLGVPYI AMHMQGTPTD MQQHPHYEDV TLEVLDYFVR
KRAQCLEAGI KDIIIDPGFG FGKTIAHNYT LLKKLNVFHM LECPLLVGIS RKSMIYKLLE
TTPAEALNGT TILHTLALQQ GAHILRVHDV KAAVEAVKIT QYMNRL