| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5462 |
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| Symbol | |
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| ID | 8361639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6971880 |
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| End bp | 6972395 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644967608 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003125092 |
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| Protein GI | 256424439 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000465068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATTAG CAATATTTCT CTCACAAGTG GTCCCCGTCA GGCAGAAGCT GTACCGCTTC
GCTTACAGAC TGCTGGAAAA TGAGGAGGAT GCAATGGACG TAACACAGGA TACCCTGATG
AAGGTATGGC AACAACAGGA GCGGATGAGT GATCTGCAGA ATATGGAGGC CTGGTGTATG
CGTATCGTGC GCAATCTGGC GCTGGACAAG CTGAAGGCAA GAAAGTACCG CCGGTCAGAA
GACCTGGATA CTGTCAGCGA ACTGCCAGCT GTACAGCAGG AGAATCCACA CATCGTTGCG
GAGAAACAGG ACGTCATGAA AAGAGTGCAT GGTATCATTG CCGGCTTGCC GGAAAAATAC
CGTACTATTA TACAATTGAG AGATATCGAT GGGTACAGCT ACCAGGAAAT AGCAGACATC
CTGGTCATCG ACCTGAGTGA GGTGAAGACC AATCTTCACC GGGCCAGAAA AGCGGTACGT
GAACAATTAC AAAAACTGCA AGTGTATGGA GTTTAA
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| Protein sequence | MSLAIFLSQV VPVRQKLYRF AYRLLENEED AMDVTQDTLM KVWQQQERMS DLQNMEAWCM
RIVRNLALDK LKARKYRRSE DLDTVSELPA VQQENPHIVA EKQDVMKRVH GIIAGLPEKY
RTIIQLRDID GYSYQEIADI LVIDLSEVKT NLHRARKAVR EQLQKLQVYG V
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