Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5460 |
Symbol | |
ID | 8361637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6970816 |
End bp | 6971337 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644967606 |
Product | hypothetical protein |
Protein accession | YP_003125090 |
Protein GI | 256424437 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000323093 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.966986 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT TTTTGTTTTT GGTGCTGTTC CTGACAGTCA CCGGTACGCA TCTCTTTGCC CAACAAGGTA GTGGCATCGA CCGTTTTTTT GAGAAATACG AAAATGATCA GACCTTTACA CTGATCAGCG TAACCCCCAA AATGTTCAGT ATGTTCAGCA AGCTGGACAT CAACTCAAAC GAAGGAAAAC AATTCCTACA GATCGTCAAA AGGATCAAAG GACTGCGGAT ACTGGCCAAG GAAAATACCA AAGGGGGAAA TCTGTTGTTC AAAGAAGCTT CTTCTCTGTT GAGTAAAGAG TTTGAAGAAC TGATGACAGT ACGTGATGGA AAAGATGACC TTCGCTTTAT GGTAAAGGAA AATGCCAAAG GTAATATTGC GGAACTGATC ATGCTGGTAG GGAGTGACAC AGAGTTTCTT GCCATGAGCC TCATCGGCGA TATTGACCTC AACGAGATCA GTCAGCTGGC CAACAGCATG AATATCGACG GATTCGACAA ACTGAAAAAC ATCAAGAAAT AA
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Protein sequence | MKRFLFLVLF LTVTGTHLFA QQGSGIDRFF EKYENDQTFT LISVTPKMFS MFSKLDINSN EGKQFLQIVK RIKGLRILAK ENTKGGNLLF KEASSLLSKE FEELMTVRDG KDDLRFMVKE NAKGNIAELI MLVGSDTEFL AMSLIGDIDL NEISQLANSM NIDGFDKLKN IKK
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