Gene Cpin_5460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5460 
Symbol 
ID8361637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6970816 
End bp6971337 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content43% 
IMG OID644967606 
Producthypothetical protein 
Protein accessionYP_003125090 
Protein GI256424437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000323093 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.966986 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT TTTTGTTTTT GGTGCTGTTC CTGACAGTCA CCGGTACGCA TCTCTTTGCC 
CAACAAGGTA GTGGCATCGA CCGTTTTTTT GAGAAATACG AAAATGATCA GACCTTTACA
CTGATCAGCG TAACCCCCAA AATGTTCAGT ATGTTCAGCA AGCTGGACAT CAACTCAAAC
GAAGGAAAAC AATTCCTACA GATCGTCAAA AGGATCAAAG GACTGCGGAT ACTGGCCAAG
GAAAATACCA AAGGGGGAAA TCTGTTGTTC AAAGAAGCTT CTTCTCTGTT GAGTAAAGAG
TTTGAAGAAC TGATGACAGT ACGTGATGGA AAAGATGACC TTCGCTTTAT GGTAAAGGAA
AATGCCAAAG GTAATATTGC GGAACTGATC ATGCTGGTAG GGAGTGACAC AGAGTTTCTT
GCCATGAGCC TCATCGGCGA TATTGACCTC AACGAGATCA GTCAGCTGGC CAACAGCATG
AATATCGACG GATTCGACAA ACTGAAAAAC ATCAAGAAAT AA
 
Protein sequence
MKRFLFLVLF LTVTGTHLFA QQGSGIDRFF EKYENDQTFT LISVTPKMFS MFSKLDINSN 
EGKQFLQIVK RIKGLRILAK ENTKGGNLLF KEASSLLSKE FEELMTVRDG KDDLRFMVKE
NAKGNIAELI MLVGSDTEFL AMSLIGDIDL NEISQLANSM NIDGFDKLKN IKK