Gene Cpin_5449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5449 
Symbol 
ID8361626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6961486 
End bp6962340 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content48% 
IMG OID644967595 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003125079 
Protein GI256424426 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.961923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.71434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGATCT TACTGAAGCT TATGCTGTGC GGTATGCTGT TACTACAAAT AAAAGCAAAC 
GCACAGACGA CAGACACCAC CAACCTCCAC TATACCGATA GTACCAGATC TACGGAGACG
CGTACATTAA CGGCAGCCGA TACCACTATA CGTTATCGTA TAAACGGCGC CTATCTGGGT
AGCATCTGGA GTGACCTGAA ATATACCGTT TCAAGACCTG CGCACTGGCA GGGAAAGGAC
TTCGTCAGAC TGGGCATCGT GCTCGGAGCT GCCGGTGGTC TCATGGGTGT AGACTATGAA
GTCAAACAAT TCTTTGGCCG TAACCACACC AATTTCTGGA ACAGTGTAAC GGGTCAGGTA
GAACCATTCG GAAACGCCTA CTCTCCTTAC CTCGTAGGTG GTATGTACCT TGCCGGTGTG
ATTGCCAAGG ACAGGAAATT AGAACATACG TCCCTGATGA CCGCCAAGTC ACTTTTACTG
TCAACGCTCA TTTATACTTT CGCCAAATCG GTGGTAAGAC GTGGTCGTCC GACCTATTAC
GACGATCCGT TTGTATACAA TGCGCCTTTC TCTATGGATA AATACCATAC CTCCTTCCCT
TCCGGTCATA TGCTGACAGT GACCTCTGTC GCAACAGCAC TAGCTGAAGC ATATGGAGAT
GAACATCCGT GGGTACCCTG GGTGACTTAT TCCATCGCCA TCATGACCGG TACCACCCGC
CTGTACCAGG AGAGACACTG GAGCAGTGAT GTATGGTTAG GAGCTTCACT GGGTTACTTT
GTAACCAAGG GTATCTTTAA AAGACAAAAA GATCTGGAGA GGAAGAAAGC GCTAAAGGCA
CATATGGCGC CATAA
 
Protein sequence
MKILLKLMLC GMLLLQIKAN AQTTDTTNLH YTDSTRSTET RTLTAADTTI RYRINGAYLG 
SIWSDLKYTV SRPAHWQGKD FVRLGIVLGA AGGLMGVDYE VKQFFGRNHT NFWNSVTGQV
EPFGNAYSPY LVGGMYLAGV IAKDRKLEHT SLMTAKSLLL STLIYTFAKS VVRRGRPTYY
DDPFVYNAPF SMDKYHTSFP SGHMLTVTSV ATALAEAYGD EHPWVPWVTY SIAIMTGTTR
LYQERHWSSD VWLGASLGYF VTKGIFKRQK DLERKKALKA HMAP