Gene Cpin_5436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5436 
Symbol 
ID8361613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6948684 
End bp6949643 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content47% 
IMG OID644967582 
ProductPhoH family protein 
Protein accessionYP_003125066 
Protein GI256424413 
COG category[T] Signal transduction mechanisms 
COG ID[COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.479856 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACAGAAT CAATCATCAG CTTAGATAGT ATTAACCCTA TCGAGTTCTT CGGAGTAAAC 
AATGGAAAAC TTGATCTGCT GAAAAAGAAA TTTCCACTGT TAAAGATCCT CTCCCGTGGA
ACACAACTCA AGCTCTCGGG CGCTCAGGAA GAAGTAGCCA CTGCTCAGGA AAAAATCGGA
CAAATCATTT CTTATCTCGA ACGTAACGGT AATCTGAGCG AAAACTATTT TGAACAGATC
CTGGGTGATG AAGAAACGGT AGATGCATTC AAGGACCGCA ATTCCAATGA GGTCCTGGTA
TTCGGTCCTA ATGGCCGCAA TGTAAAAGCC AGAACAGCCA ACCAGAAGAA AATGGTATCC
CTGGCTGACA AAAATGATAT CATTTTTGCC ATCGGCCCTG CTGGTACCGG TAAAACTTAC
ACCGCTGTGG CGCTTGCTGT AAGAGCATTA AAAAACAAAG CTGTCAGAAA GATCATCCTG
ACCCGTCCCG CAGTAGAAGC AGGTGAAAAC CTGGGTTTCC TGCCGGGTGA CCTGAAGGAG
AAGATCGATC CATATCTGCG TCCGCTGTAT GACGCACTGG ATGACATGAT CCCTGCTGAC
AAACTCAGTT ATTTCATGAC CAACCGTGTC ATTGAGATTG CTCCGCTGGC GTATATGCGC
GGACGTACAC TCGATAACGC TTTCATCATC CTGGATGAGG CCCAGAACGC CACCGAACTT
CAGATCAAAA TGTTCCTGAC ACGTATCGGT GCATCAGCCA AAGCTATTAT CACGGGCGAC
CTTACGCAGA TTGACCTGCC TAAAAATCAG AAATCCGGAT TGGAAAAAGC GACCCGTATC
CTTCGGAATA TCGATGGTAT CGGCTACCTC CAGCTGGACG AAGAAGACGT AGTAAGACAC
AGACTGGTGA AGGCTATCAT ACGTGCGTAT GATGCGGCTA AGGAAAAGGA GGACCACTAA
 
Protein sequence
MTESIISLDS INPIEFFGVN NGKLDLLKKK FPLLKILSRG TQLKLSGAQE EVATAQEKIG 
QIISYLERNG NLSENYFEQI LGDEETVDAF KDRNSNEVLV FGPNGRNVKA RTANQKKMVS
LADKNDIIFA IGPAGTGKTY TAVALAVRAL KNKAVRKIIL TRPAVEAGEN LGFLPGDLKE
KIDPYLRPLY DALDDMIPAD KLSYFMTNRV IEIAPLAYMR GRTLDNAFII LDEAQNATEL
QIKMFLTRIG ASAKAIITGD LTQIDLPKNQ KSGLEKATRI LRNIDGIGYL QLDEEDVVRH
RLVKAIIRAY DAAKEKEDH