| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5432 |
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| Symbol | |
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| ID | 8361609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6943558 |
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| End bp | 6944565 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967578 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_003125062 |
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| Protein GI | 256424409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.318763 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.982088 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACC TATTCCTCTT ATCCATTCCT TTTTTGATTT GCTGCCATTC CGGTAAACAA
GGGGAGTCTG TCCGGAAAAA CGGCGCTGAC TCGGCCCTCT ATGCCGCTAT GGTATTGCCA
CTAACCGACT CTATCGCACA ATTCTCTGAC AACGAAGCTT TATACTTCCG CAGGGCCTTG
CTGCTCTTCA ATACAGATCC TGCACTGGCA CAGAAAGACT TTGAAAAGGC GGCACAGCTG
AAACCGGCCG TAACTGATTT CTGGGCGGGC GCGGGCGAAG CTGCACTGGT ACTGGAACAC
TATCCCCAGG CTATTGCGCA TTTTGAAAAG GCATTACAGA CAGCTCCCGG CTATCCTTAT
CTGCAATACA GACTGGCGAC AGCCCTGATT GAGAACAAAC AGTATACCTC AGCTGATAGT
CTGGCAGGAG TGCTGGCACA ATCTACCGGG ACCTATGATA AAGCGTATTA CCTGAAAGCA
AGGATTGCAG AAGAAAACAA GGACACTACC CTGGCGATCA CTCACCTGAC GGCAGCAGTA
GATCATGCAG GATTACAGAG TGATTACGAT GCTGTAATGG AACTGGGGGA TCTGTTGCTG
GCCAGACGAT CTGCCAATAC GCCTAAATAC TACAAACTGG CGGCAAGACT GGACTCTGTG
AATGCAGAAC CATATATTGC CCTGGGCCAG TATTATGAGC AAACCGGCAA TACTTCAGCA
GCCGTTACTG CTTATATGAG CAGTATCTCT ACTGATCCCG ATGATGAAAG AGCCTATATG
GCCCTGGGCA CGATCAATGT GCGGAAAAAG AACTGGAAAG AAGGATTACG TTATTTCGAT
CTGGCAGCTA AAACTTCTCC TAATAATTCG GAGGCGTATT ACAACCGGGC ACAGTGTCTG
GAGCAACTGG GCCGTAAAGA AGATGCGATT GACGATTATA TCAAGGCACT CACCTTCAGA
AAGGAATATC CGGAGGCGAA AGCTGCATTG GAGAAACTAA AAAAATAA
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| Protein sequence | MKYLFLLSIP FLICCHSGKQ GESVRKNGAD SALYAAMVLP LTDSIAQFSD NEALYFRRAL
LLFNTDPALA QKDFEKAAQL KPAVTDFWAG AGEAALVLEH YPQAIAHFEK ALQTAPGYPY
LQYRLATALI ENKQYTSADS LAGVLAQSTG TYDKAYYLKA RIAEENKDTT LAITHLTAAV
DHAGLQSDYD AVMELGDLLL ARRSANTPKY YKLAARLDSV NAEPYIALGQ YYEQTGNTSA
AVTAYMSSIS TDPDDERAYM ALGTINVRKK NWKEGLRYFD LAAKTSPNNS EAYYNRAQCL
EQLGRKEDAI DDYIKALTFR KEYPEAKAAL EKLKK
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