Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5431 |
Symbol | |
ID | 8361608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6942115 |
End bp | 6943422 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967577 |
Product | threonine synthase |
Protein accession | YP_003125061 |
Protein GI | 256424408 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0498] Threonine synthase |
TIGRFAM ID | [TIGR00260] threonine synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.418256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.890668 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATATT TCAGTCTACA GAATAAACAA CACGTTGTAT CTTTTGAAGA AGCCGTAGTA CAGGGTCTCG CACCCGATAA AGGATTATAC TTCCCCGAGC GTATTCCGGC TTTTGAGCAA GCATTCCTCA ATGATATCGT TCATAAAAAC GACCTCGATA TTGCTTACGC AGCGATACAG CCATTTGTAG GAGAAGAAAT TCCCGAAGCT ACATTAAGGC AGATCATTGC GGATACGCTT AGTTTTCCTT TCCCGGTGGA GAAAGTAGAA GGGAATGTAT ATTCCCTGGA ACTCTTCCAT GGTCCTACCC TGGCATTTAA GGACGTCGGC GCACGCTTTA TGGCGGGTTG CCTGGGTTAT TTCAGAAGAA ATGATAGCCG TCCGGTAACT GTACTCGTAG CTACTTCCGG TGATACCGGC GGTGCTGTTG CCAACGGTTT CTATAATGTG CCCGGCGTAC GTGTAGTGAT CCTTTACCCT TCCGGCAAAG TGAGCACCTT ACAGGAAAAA CAGCTGACCA CACTCAATGG CAACATTACA GCGCTTGAAA TAGACGGTAC TTTTGATGAT TGTCAGCGGA TGGTGAAAAC GGCTTTTCTG GATGAAGCTT TGCAGTCACA CGTAATGCTG ACCAGCGCTA ACTCTATCAA CGTCGCACGC TGGCTGCCGC AGATGTTCTA TTATCTGCTG GCATACAAAC AGCTTAGCGC TGCCTATCCT GATATCGTAT TCTCTGTACC AAGCGGCAAC TTTGGTAATA TCTGTGCAGG CATGATGGCG GCAGCGATGG GGCTTCCGGT AAAACATTTC GTGGCCAGTA CCAATGTGAA TGATACGGTG CCAAGATTCA TGCAGACAGG CGCGTATACG CCAGGTAAAG CGACAGCTAC ACTGTCTAAT GCGATGGACG TGGCTGATCC GAGCAACTTT GTACGTATCC TTGAATTATT TGCGAATAGT TTGCCGGCTC TGAAAGAGAA ACTGACATCT ATTTCCTTCA ACGATAAAGA TACCGCGGCT ACGATGGAAC AGGTCTGGAA AGACTACCAG TATATGCTGG ATCCTCATGG CGCGGTAGGC TATCTCGGCC TGAAACAGTA TTTGCAGACG ACTGGTCCGG ATACAAAAAC TGCCGGTGTA TTTCTGGAGA CAGCGCATCC GGTTAAATTC GCAGATACTG CTCCGGCGTC TCTGCAGGAT AAGATCGTAA CGCCTGACAG GGTACAGTCC CTGTATGACC TGGAGAAACA ATCCATACAA CTCCCGGCTG AGTATAATGC ATTAAAACAA TGGCTCATGG CCAATTGA
|
Protein sequence | MKYFSLQNKQ HVVSFEEAVV QGLAPDKGLY FPERIPAFEQ AFLNDIVHKN DLDIAYAAIQ PFVGEEIPEA TLRQIIADTL SFPFPVEKVE GNVYSLELFH GPTLAFKDVG ARFMAGCLGY FRRNDSRPVT VLVATSGDTG GAVANGFYNV PGVRVVILYP SGKVSTLQEK QLTTLNGNIT ALEIDGTFDD CQRMVKTAFL DEALQSHVML TSANSINVAR WLPQMFYYLL AYKQLSAAYP DIVFSVPSGN FGNICAGMMA AAMGLPVKHF VASTNVNDTV PRFMQTGAYT PGKATATLSN AMDVADPSNF VRILELFANS LPALKEKLTS ISFNDKDTAA TMEQVWKDYQ YMLDPHGAVG YLGLKQYLQT TGPDTKTAGV FLETAHPVKF ADTAPASLQD KIVTPDRVQS LYDLEKQSIQ LPAEYNALKQ WLMAN
|
| |