| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5427 |
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| Symbol | |
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| ID | 8361604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6936610 |
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| End bp | 6937767 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644967573 |
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| Product | homogentisate 12-dioxygenase |
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| Protein accession | YP_003125057 |
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| Protein GI | 256424404 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3508] Homogentisate 1,2-dioxygenase |
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| TIGRFAM ID | [TIGR01015] homogentisate 1,2-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0911564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.337883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCATT ATCATAAACT GGGAAACGTC CCTCATAAAC GTCATACGCA ATTCCGTAAG
CCAGACGGTA CGTTGTATGC TGAACAATTA TTTTCAACAG AAGGGTTTTC TTCCAATTCC
ACCTTGCTCT ATCATTGTCA TCCGCCTACA GAAATTACAA AAGTGGATGA ACCTTATAGC
GTCGCTCCCC GTGTAGCAGA AGAGAAGATG CTGAAGCACC GTAGTTTCCA GGGATTCAAT
ATCAAACCGG AAGAAGATTA TCTGAAAAGC AGAAAACCTG TATTGGTGAA TAGTGACTGT
CATATTTCCC TGGCTGCGCC CAGACAAAGC ATGTCTGATT ACTTTTACAA GAATGCAGAT
GCTGATGAAC TGATCTTCGT ACATGAAGGC ACAGGGGTGT TGCATACGCA ATACGGTCAG
CTGCCATTTG GTTATGGTGA TTATCTGCAG ATACCCAGAG GAACTATTTA CCAGATAAAA
TTCACTGGTA CAGATAACAG GTTGTTCATC GTAGAGTCCT TTAGTCCTAT TCGTTATCCG
AAACGTTATC TCAGTCAGTA TGGACAATTG CTGGAACACG CTCCCTATTG TGAGCGTGAT
ATCCGCCAGC CACAAAATCT GGAAACGATC GATGAAGCAG GCGATTTCCT GATCCGCATC
AAAAAGAAAG GTATCATGTA TCCTATCCAT TATGCGCATC ATCCTTTTGA TGTAGTGGGA
TGGGACGGCT GCGAATATCC TTTCGCCTTT TCTATCCATG ACTTCGAACC TATCACTGGT
CGCGTGCACC AGCCACCTCC GGTGCATCAG ACATTCGAGG GACATAATTT TGTGGTATGT
TCTTTCTGTC CGCGTTTGTT TGATTACCAT CCGCAGGCGA TTCCTGCGCC ATACAATCAT
AGCAATATTG ATAGCGATGA AGTGTTGTAT TATGTAGACG GTGATTTTAT GAGCCGTAAA
CACGTGACCA GGGGCATGAT CACTTTACAT CCTGGTGGTA TTCCTCACGG ACCGCATCCC
GGGGCGGTTG AAAAGAGTAT AGGTGCAAAG GAAACGAAAG AACTCGCTGT AATGGTAGAT
ACTTTTCACC CGCTGCAGAT TACGCAGGAA GCATTGGAGA TAGAAGATGA ACGGTACACA
ATGAGTTGGG CAGAATAA
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| Protein sequence | MPHYHKLGNV PHKRHTQFRK PDGTLYAEQL FSTEGFSSNS TLLYHCHPPT EITKVDEPYS
VAPRVAEEKM LKHRSFQGFN IKPEEDYLKS RKPVLVNSDC HISLAAPRQS MSDYFYKNAD
ADELIFVHEG TGVLHTQYGQ LPFGYGDYLQ IPRGTIYQIK FTGTDNRLFI VESFSPIRYP
KRYLSQYGQL LEHAPYCERD IRQPQNLETI DEAGDFLIRI KKKGIMYPIH YAHHPFDVVG
WDGCEYPFAF SIHDFEPITG RVHQPPPVHQ TFEGHNFVVC SFCPRLFDYH PQAIPAPYNH
SNIDSDEVLY YVDGDFMSRK HVTRGMITLH PGGIPHGPHP GAVEKSIGAK ETKELAVMVD
TFHPLQITQE ALEIEDERYT MSWAE
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