Gene Cpin_5425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5425 
Symbol 
ID8361602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6935075 
End bp6936067 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content47% 
IMG OID644967571 
Productaldo/keto reductase 
Protein accessionYP_003125055 
Protein GI256424402 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00742012 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.209016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATACA GGCAATTAGG AGAAAGTGAT CTGAAGGTAT CTGCCATTAC ATTTGGCGCA 
TGGGCGATTG GTGGATGGAT GTGGGGTGGT ACGGAGGCAA ATGATGCCGT AAGAGCGATC
CACGCATCTA TAGACGAAGG TGTTACTTCT ATCGACACTG CGCCGATCTA TGGACAGGGA
TTGAGTGAAG AGCTGACCGG CGAAGCGCTG AAAGGACTGG ACAGAACAAA AGTGCAGATC
CTGACGAAGT TTGGTATGCG CTGGAATCTG GCGAAAGGTT CACTCGCTTT CAATAGTAAG
GATAATGCCG GTAATCCGAT TGATATTTAT AAATATGCAG GGAAGGAAAG TGTGATTGAA
GAATGTGAGA ACAGTCTGAA GAGACTGGGT ACCGATTACA TTGATCTGTT ACAGATTCAC
TGGCCGGATG TAACGACACC GATCGATGAA ACATTTGAGG CAGTTTTACG TTTAAAAGAG
CAGGGAAAAA TCCGTGAAGC AGGTGTGTGC AACTATAATG TAGCGCAGAT GAAAGAAGCC
GGGGCCGTGC TTAAACTCGC TTCTAACCAG GTACCATTCA GCATGGTGGA AAGAACGATA
GAGAACGAGC TGGTGCCTTA CTGCATTGAG AATAAAAAAG CGATACTGGC TTACAGTCCG
CTGCAAAGAG GTTTGCTCTC CGGTAAGATA AAACCGGGTC ATCAGTTTGG GGAAGGAGAT
ACCCGTGCGG GCTCTAAATT TTACCAGGCG GATAACCTGA ACCGTATCAA CGCTTTCCTG
GATCAGATAA AACCCATGGC CGAAAGTAAA AGTGTGACAC TCGCACAACT GGTCATTCGC
TGGACGATTG AACGTCCTGG CATTACAGTT GCACTGGTAG GTGCACGTAA CGCAGAACAG
GCGATCCAGA ATGCAAGAGC GATCAATGTG AAGCTCGGTG CAGAAGAAAT CAAGTTTATC
AATGACAGAT TGTACCAGCT GCAACTGGTA TAG
 
Protein sequence
MEYRQLGESD LKVSAITFGA WAIGGWMWGG TEANDAVRAI HASIDEGVTS IDTAPIYGQG 
LSEELTGEAL KGLDRTKVQI LTKFGMRWNL AKGSLAFNSK DNAGNPIDIY KYAGKESVIE
ECENSLKRLG TDYIDLLQIH WPDVTTPIDE TFEAVLRLKE QGKIREAGVC NYNVAQMKEA
GAVLKLASNQ VPFSMVERTI ENELVPYCIE NKKAILAYSP LQRGLLSGKI KPGHQFGEGD
TRAGSKFYQA DNLNRINAFL DQIKPMAESK SVTLAQLVIR WTIERPGITV ALVGARNAEQ
AIQNARAINV KLGAEEIKFI NDRLYQLQLV