| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5420 |
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| Symbol | |
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| ID | 8361597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6929856 |
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| End bp | 6930992 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967566 |
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| Product | 4-hydroxyphenylpyruvate dioxygenase |
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| Protein accession | YP_003125050 |
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| Protein GI | 256424397 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
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| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.762295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.240118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATACAA CTACAGATGC TGCCGTTTCG GCCGTTCCCG CTAACGCGCA GGACTTTTTA
CCATTGAATG GTACAGATTA CGTCGAATTT TACGTGGGTA ATGCCAAACA GGCTGCTCAT
TATTATAAAA CCGCATTTGG CTTCCAGTCA CTGGCTTATG CCGGTCCGGA AACAGGTGTA
AAAGACCGTG CTTCTTACGT ACTCGTACAG AATAAACTGC GTTTTGTACT GACCACGCCA
CTGAATCCTG ACAATGAGAT TGCACAGCAT ATACTGGAAC ACGGAGATGG TGTAAAAGTA
ATCGCACTGT GGGTGGATGA TGCCCGTGCT GCATTCGAAG AGACCGTTAA AAGAGGTGCA
AAACCATATC TGGAGCCTGT TACGGAAGAA GATGAATTTG GTGCTGTCGT ACGCAGTGGT
ATCCATATCT ATGGCGATAC AGTACATCTG TTCGTTGAAC GTAAGAACTA TAACGGTCCG
TTCCTGCCAG GTTATAAAGC ATGGAATCCG GCTTATCAGC CAACGGATAC CGGTCTGCAA
TATGTAGATC ATTGCGTGGG TAATGTGGGC TGGAATGAAA TGAATACCTG GGTAGATTTC
TATGAGCAGG TGATGGGCTT CCGCAATTTG CTGTCCTTCG ACGATAAAGA CATTTCTACC
GAGTATTCTG CCCTCATGAG TAAGGTCATG AGCAATGGCA ACGGACGTGT GAAATTCCCG
ATCAATGAGC CGGCAGAAGG TAAAAAGAAA TCCCAGATCG AAGAGTACCT GGATTTCTAT
CGTGGCGCAG GAGTACAGCA CGTTGCGATC GCTACCAACA ATATTATCCA GACAGTGACC
GATCTGCAGA ACAGAGGGGT TGAATTCCTG AAAGTACCGG AGTCTTACTA TGCTACATTG
CTGGACAGGG TAGGGCAGAT CGATGAAGAC CTGCTGCCGC TGAAACAGCT GGGTATCCTG
GTTGACCGCG ATGATGAAGG ATATCTGTTG CAGATCTTTA CAAAACCTGT ACAGGATCGT
CCGACAGTAT TCTTTGAAAT CATCCAGCGT AAAGGTGCTA AATCTTTCGG TAAAGGTAAT
TTCAAAGCGC TGTTTGAATC TATTGAAAGA GAACAGGCGC TGAGAGGCAA CCTGTGA
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| Protein sequence | MHTTTDAAVS AVPANAQDFL PLNGTDYVEF YVGNAKQAAH YYKTAFGFQS LAYAGPETGV
KDRASYVLVQ NKLRFVLTTP LNPDNEIAQH ILEHGDGVKV IALWVDDARA AFEETVKRGA
KPYLEPVTEE DEFGAVVRSG IHIYGDTVHL FVERKNYNGP FLPGYKAWNP AYQPTDTGLQ
YVDHCVGNVG WNEMNTWVDF YEQVMGFRNL LSFDDKDIST EYSALMSKVM SNGNGRVKFP
INEPAEGKKK SQIEEYLDFY RGAGVQHVAI ATNNIIQTVT DLQNRGVEFL KVPESYYATL
LDRVGQIDED LLPLKQLGIL VDRDDEGYLL QIFTKPVQDR PTVFFEIIQR KGAKSFGKGN
FKALFESIER EQALRGNL
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