Gene Cpin_5418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5418 
Symbol 
ID8361595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6928499 
End bp6929257 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID644967564 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003125048 
Protein GI256424395 
COG category[S] Function unknown 
COG ID[COG3034] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.221879 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGG TCGTTTTAGC AGTTTTAATG CTGCTGGGAA TGGGAAAAGT GCAGGCCCAG 
CAGATGCAGC AGTCATTTCT GGATAACCAG AAGATGTTTC CGAAAGTAGG CACTGCCTAC
AGGGATAAGG AAGAGCAACT TAGGGAAGAG TTCCAGAAAA AGGGACTGGC CTACCCGGCT
AAATACATTT TCATACGTTC CTTTAAGCTG GACAGTGAAC TGGAAATCTG GGTAAAAAAC
AGTGTTGCCG ATACTTTCCG TCTGTTTAAA TCCTACCGCG TCTGTACCCT GTCAGGTAAA
ATGGGGCCAA AACGTAAGGA AGGAGACAGA CAGGTACCGG AAGGATTTTA CTATATCAAT
GATTTCAACC CGAATAGCAG CTATCATCTG TCGCTGGGTA TCAACTATCC GAACTTTGCA
GATAAGATCC TCAGTGACCC TAAAAAGCCG GGTGGCGAGA TCTATATTCA TGGTAGTTGT
CTGACAATAG GCTGTATACC ACTGACGGAC GATATCATTG AGGAAGTGTA TGTAATGGCA
GTGAATGCAA AGAATTCCGG CCAGGATTTC ATTCCTGTAC ACGTATTCCC GGTGAAGTTT
GGCAATATAC GCTCCATGGA ATACCTGGGT AATTTCACCC TGAAAGACAA TTCTTCCGAA
AAATTCTGGG TGGACCTGAA ATATGCTTAC GACTATTTCG AAGCCCATCA CAAGCTGCCG
GTAGTACTGG TGGATGAAAA AGGGAAGTAT ATTATGTAG
 
Protein sequence
MKQVVLAVLM LLGMGKVQAQ QMQQSFLDNQ KMFPKVGTAY RDKEEQLREE FQKKGLAYPA 
KYIFIRSFKL DSELEIWVKN SVADTFRLFK SYRVCTLSGK MGPKRKEGDR QVPEGFYYIN
DFNPNSSYHL SLGINYPNFA DKILSDPKKP GGEIYIHGSC LTIGCIPLTD DIIEEVYVMA
VNAKNSGQDF IPVHVFPVKF GNIRSMEYLG NFTLKDNSSE KFWVDLKYAY DYFEAHHKLP
VVLVDEKGKY IM