Gene Cpin_5413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5413 
Symbol 
ID8361590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6921507 
End bp6922463 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content43% 
IMG OID644967559 
Producthypothetical protein 
Protein accessionYP_003125043 
Protein GI256424390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.221209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAA TATTAACCGT TGTAAAAATT GTCATTGCGT TCGTAGCATT GTTCAGCGTT 
AACCCTTTGA AAGCCCAGCA GGATACCGGT TCCTTTAAAG TAAAAGGGGA ATCCAGTAAA
TTTTATGTAG TAAGATTTAA AGATGCCGCG CTCTGGCAAC ATGAAGCCGC TGAATTGATA
CTTAGCAGGA TTAACATTCA TGAAGACAGT GCCTGGAGCG GTAGTCTTGT GGCCAAATTC
AGATTTCGTA TTGACGCCTG GGCCAATGGT CCGTCATTCA TAGATGCAGA TATCAAACAA
AAGAGTCCTT ATAAGAACAC ATTCATTGCT GCATGGCGGG ATGGAACCTT TGATAATGCC
TCAGGTCAGA TCATCATCTG GCTTCGTGGT AACACGACCT ATCATTATAA GGCGCCTTTC
TCTGTAGGTC CGATTTCAAT ACATGATGGT GTGTCAAATC CAGTAGACTA TAAGCCCGGC
GCAACGACCT ATACCTTCAA AACGGCGGTG GATGCTAACG TGAATACGAA CGGTATGACC
TATGCCGGTC ATGCAAATTT CAATGGCACA GGTTCGAATT ATTTTGCGGG AAGCGTGGGC
ATTGGTGTTA TTAATAAATC AGCAACGTAT AAACTGGCTG TAGATGGTAC CATCGGCGCA
AGGAAAATAA AAGTGACGCA GGAAACCTGG GCTGACTTTG TATTTGATAA AGATTATGAG
TTGCCGTCTT TACAGGAGTT GAATGCTTAT ATAAAAGAAC ATAAGCATTT ACCTGGTGTT
CCTTCCACAG AAGAGGTTAC TAAAAAGGAC CTGGACCTGG GTGAGATGAA TAAGATCCTG
TTGCAGAAAA TAGAGGAACT GACGCTGCAT CTGATAGAGC AGGATAAGCA GAACCAGGAG
CAGAAGCAGC AGATAGAATT GCTGAATAAG AAGCTGGATG CGATGCAGGC TAAATAG
 
Protein sequence
MKRILTVVKI VIAFVALFSV NPLKAQQDTG SFKVKGESSK FYVVRFKDAA LWQHEAAELI 
LSRINIHEDS AWSGSLVAKF RFRIDAWANG PSFIDADIKQ KSPYKNTFIA AWRDGTFDNA
SGQIIIWLRG NTTYHYKAPF SVGPISIHDG VSNPVDYKPG ATTYTFKTAV DANVNTNGMT
YAGHANFNGT GSNYFAGSVG IGVINKSATY KLAVDGTIGA RKIKVTQETW ADFVFDKDYE
LPSLQELNAY IKEHKHLPGV PSTEEVTKKD LDLGEMNKIL LQKIEELTLH LIEQDKQNQE
QKQQIELLNK KLDAMQAK