| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5401 |
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| Symbol | |
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| ID | 8361578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6908638 |
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| End bp | 6909246 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644967548 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003125032 |
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| Protein GI | 256424379 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0660181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATA ATACTCCTGA CTGGTATCAT CGGCTGAAAG AGAAGTATCC AATAGTATCG
GATGCAGAAT GGGCATTACT GGATAAAATG ACAAAAGTCA AAACTATAAA AAAAGGCGAC
AGCTTTTTAC GTTATGGTAA AATTGCGCGT TATGCGGCTT TTGTGGTATC CGGCCAGTTT
GCGTTTACAA TCATTGATGA TGAAGGGAAT GAGAAGATCA TCCGGTTTGG TTTTGCAGAC
GATTTTCTGG CCAATTGTGA GAGTTATTAC CGGATGGCCG CGTCCGCAGT AGCGATTACC
GCATTGGAAG ATGCCGTGAT CAGGAGGATC AATATTAAAC AGTTACAGCC TTTGTATGAT
CTGCATATGA GTCTGTCCGC AGTAAACCTG CAGATTTACC AGGAACTAGC AGAACAAACA
TTTGAGCATC AATATATTCT ATCCTTGAAA AGCCCCGTAA AAAGGTATCA GTTTCTACTG
AAACACAGAC CGGCGATCAT TAAAAAAATC TCTCTGACCA ATATCGCCAG GTACCTGTAT
GTGAGTCGGG AAGCCCTTAG CAGGGCCAGA TTACTGCTGC TGAACAAGGG GCAGCGCTTT
TGTGATTGA
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| Protein sequence | MKHNTPDWYH RLKEKYPIVS DAEWALLDKM TKVKTIKKGD SFLRYGKIAR YAAFVVSGQF
AFTIIDDEGN EKIIRFGFAD DFLANCESYY RMAASAVAIT ALEDAVIRRI NIKQLQPLYD
LHMSLSAVNL QIYQELAEQT FEHQYILSLK SPVKRYQFLL KHRPAIIKKI SLTNIARYLY
VSREALSRAR LLLLNKGQRF CD
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