| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5397 |
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| Symbol | |
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| ID | 8361574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6903711 |
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| End bp | 6904895 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967544 |
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| Product | glycosidase PH1107-related |
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| Protein accession | YP_003125028 |
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| Protein GI | 256424375 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.392278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.225601 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAATT TTAACGCAAG ACTGCAGGCA TTACAGGTCG CACATCAGCA ACTGCTGCAT
ATGAACAATG AAGCCATATT ACCCGGTAAC GGTATTTTTC TCAGATATAA AAACCCGGTA
CTCACGGCGA CACATGTACC GTTGGAATGG TGTTATGACC TTAACCAGGC ATCTAACCCT
CATCTCATGA CCCGCTTTGG AATCAATGCC GTATTTAATG CGGGGGCTAT CAAATGGGAA
GGGAAATATA TAGTGATCGC CCGTGTAGAG GGTTGGGACA GGAAATCCTT TTTTGCAGTG
GCAGAGAGTG ATAACGGCAT CGATGGATTT CGCTTCAGGG ACTTTCCCCT GCAAATTCCT
GAAACAGCGA TACCAGATAC CAACATTTAT GATATGCGGG TAGTACAGCA CGAGGATGGT
TATGTTTATG GATTGTTCTG TACAGAACGC CGTGATCCTT CAGCTCCCGC CGGTGATCAA
TCAGCCGCCG TTGCGCAATG TGGTATTGTA CGTACAAAAG ACCTGGAAAC CTGGGAGCGC
TTACCAGACC TGGTCACGGC CTCTGCGCAA CAACGGAATG TGGTATTACA TCCGGAATTC
GTCAATGGAA AATATATGCT CTATACACGT CCGCAGGATG GCTTTATTGA AGCCGGTAAA
GGCGGCGGTA TAGGCGTAGG CTATTGTGAT AGTATGGAGA AAGCAGTGAT CAGCACAGAG
TCTGTGATCG ATAATAAAGT GTACCATACC ATTGCGGAAG CCAAGAACGG ACAGGGACCT
GCTCCTATCC GTACACCGCA TGGCTGGCTG CACCTGGCAC ACGGCGTCAG AAATACGGCT
GCGGGCTTAC GCTATACACT ATACCTGTTT ATGACTTCCC TGGATCATCC GGAAGAAGTG
ATCTGTAAAC CAGCAGGCTA TTTTATGGCG CCCGAAGGTG ATGAACGTGT CGGCGATGTA
TCCAATGTAC TCTTCTCTAA TGGCTGGATT GCTGATGAAG ATGGTCAGGT GTTTATCTAT
TATGCAAGCA GCGATACCCG TCTGCATGTA GCCACCAGTT CCATTGCACA GCTGACCGAC
TACTGTATGC ATACAGCTCC TGACGGCCTG CGCTCTTTTG CTTCCGTCGC GACCTTATAC
AACATCATTG AAAGAAACAA AGCACTGGTA CCCGCTGAAA TATAA
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| Protein sequence | MSNFNARLQA LQVAHQQLLH MNNEAILPGN GIFLRYKNPV LTATHVPLEW CYDLNQASNP
HLMTRFGINA VFNAGAIKWE GKYIVIARVE GWDRKSFFAV AESDNGIDGF RFRDFPLQIP
ETAIPDTNIY DMRVVQHEDG YVYGLFCTER RDPSAPAGDQ SAAVAQCGIV RTKDLETWER
LPDLVTASAQ QRNVVLHPEF VNGKYMLYTR PQDGFIEAGK GGGIGVGYCD SMEKAVISTE
SVIDNKVYHT IAEAKNGQGP APIRTPHGWL HLAHGVRNTA AGLRYTLYLF MTSLDHPEEV
ICKPAGYFMA PEGDERVGDV SNVLFSNGWI ADEDGQVFIY YASSDTRLHV ATSSIAQLTD
YCMHTAPDGL RSFASVATLY NIIERNKALV PAEI
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