Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5395 |
Symbol | |
ID | 8361572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6898906 |
End bp | 6900426 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644967542 |
Product | RagB/SusD domain protein |
Protein accession | YP_003125026 |
Protein GI | 256424373 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0481462 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.244827 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT TCGCTTACAG ATATATACTC CCCGCCATGT TGGGCGTTTC CACGCTGGTG GGCTGTTCTA AATTGGATGA GCAACCCTAT GGGATGATCA ATTCACAGAC CTACTATAAA ACTGCCGACG ACGCACGGGC AGCCATTATA TATGCCTATT CCATCCTGCC GGAGGTAGGT TATTACTCAA GAGGTTATTA TATCATCACA GAATTACCGA CAGAGAATCT GACGCAGAAA GGCGATGCGG GCGTAGGCAA CTTCGAACTG GATGAATTGC GTACCACATC CACCAACCCC GATCTCGACA ATATCTGGAC CTATATGTAC AGAGGTATTG CCAGGGCGAA TGCGGTGATT GCCAATGTGC CGAAGATCCC TGGTATGACG GATGCAGAAC GTAACCAGAT CACAGGGGAA GGTTATTTCC TGCGGGCCTT ACACTTCTTT AACCTGGTAA GGATGTTTGG AGAAGTGCCT TTACGCACAA CGACTATTGA TGATGCTTCG CAGATACCTA TTGCGAAATC CCCTATCAAA GACGTCTATA CACAGATCGT CAGTGATCTG CAGGCGGCAG ATTCATTGAT TACCCAATCG CGTATCAGTG AAGGTCGTGC CAATCAACCT GCGGCAGAAG GATTACTCGC GAAGGTGTAT CTGCATCTGG CATCTTCCAA AGCATCCGGT TCTCCGGGAT ATGATTTTGT GACTAATCCG GACGAGTTAT ATGCACAGGC AAAATTATAT GCAGAGAAGG TAGTTGCCGG CCAGTCGGCA TTTGCATTAA CACCTGCATT GCCAGATATC TTTAACATTG ATATCTACAA GAAGGCGGCC GTAACAGAAC ACATTTTTGA TGCTGCTGTG GACAGAAGCG GTGACCGGGA AGGTAGTTTT TCAAAACTGC CCAACATGTT CCTGCCTGCC GACCGTCCCA TGACGATTGC CTATAACCAG TTAAAGCCGG ATAGCGTGAA GATTGATATA GGACAGGGCT GGGGACACTT CCGGACAGAA TCAGGTGTTT ATTTCAGTTA TGCGGATAAC GACCGTCGGA AAACACAGTT GATCGTGTCA TCTTATACCA ACAACGGACA AACCTACCAG CTGGATATCA GCAGCAGTTC CCGTCCTTTC ACCCGTAAGT TCATTGATCC GGCACGTATA GGAGATGCCA CCAGTGCCAA TTCTCCTATC ATCCGGTATA GTGATATCCT GCTCACCTAT GCGGAGGCCT GCGGACCTAC GGCAGATGGA TATGCTGCTG TTAATAAAAT ACGCGCCCGT GCAGGTATTG GCGATTTACA GCCCGGACTG AGTGCTGCTA CTTTCCGTAA TGCAGTCGTA CAGGAACGTG CCTGGGAACT GGCTTTTGAA GGCAGCCGTT TGTTTGATCT GCGCAGAACG AATACCATGG AAAAAGTACT GGTACAGCAA TATGGTAAAG TCATCACCAG CGGCGCTTAC TTCTTCCCGA TTCCGCAAAG GGAACTGGAT ACAAATCCTT TAATGAAATA A
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Protein sequence | MKKFAYRYIL PAMLGVSTLV GCSKLDEQPY GMINSQTYYK TADDARAAII YAYSILPEVG YYSRGYYIIT ELPTENLTQK GDAGVGNFEL DELRTTSTNP DLDNIWTYMY RGIARANAVI ANVPKIPGMT DAERNQITGE GYFLRALHFF NLVRMFGEVP LRTTTIDDAS QIPIAKSPIK DVYTQIVSDL QAADSLITQS RISEGRANQP AAEGLLAKVY LHLASSKASG SPGYDFVTNP DELYAQAKLY AEKVVAGQSA FALTPALPDI FNIDIYKKAA VTEHIFDAAV DRSGDREGSF SKLPNMFLPA DRPMTIAYNQ LKPDSVKIDI GQGWGHFRTE SGVYFSYADN DRRKTQLIVS SYTNNGQTYQ LDISSSSRPF TRKFIDPARI GDATSANSPI IRYSDILLTY AEACGPTADG YAAVNKIRAR AGIGDLQPGL SAATFRNAVV QERAWELAFE GSRLFDLRRT NTMEKVLVQQ YGKVITSGAY FFPIPQRELD TNPLMK
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