| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5388 |
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| Symbol | |
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| ID | 8361565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6888106 |
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| End bp | 6889002 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967535 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003125019 |
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| Protein GI | 256424366 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.769805 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAACG ATACTATTTT ACAGAAGAAG GTACTGCGCG AAATCACATC ATTAGGGGTA
CATGATTGTT GTTCTATTTT TTTCCGTCAC AAGAGACAGT TTGCCTTCCC TTTGCATACC
CATGAAGAAC TGGAGTTGAA TCTCGTATTG GGAGGAGCTG GCATTCAAAG GATTATAGGG
GACCATATCG GGCATATCGG CCATGCCGAG CTGGTACTGG TAGGACCGAA TCTGCCACAT
GGCTGGTTTA CCCTGGATGA CAGGGAGGAG GATATACTGG AAGTAACCCT GCAATTCCGG
AAAGAGCTGT TTACAGAAGG GTTTCTCAAT ACGGAGCTGC TGCATGCCAT CCGGAAGCTG
CTGGACAATG CAGGGAGGGG TATACTATTC ACACCCGATG TGGCGGAAAG GGTGTATGAG
AAACTGCTTG CATTGGATAA AATGAGTGGT TTTGATTCCT TTATTGGTCT GTTATCCCTG
CTGCATGAGT TGTCTGTGGC GAAGGATACT ACCCTGCTTT CCAGTGTGTC TTTTAGTCGT
GAGGAAATCG TGTCAGAGAG CCGGCAACTG GAGCAGGCAT TTGAATACAT GAACCGTCAT
TACGGGAATC CGATTGCCCT GACAGCGATA GCCAAAGTGG TGCATATGTC TGAAGCTTCT
TTCAGCCGTT TTATGAAGGC GCAGACCGGA TTGACCTTTA CAGAAAACCT GGTGGAACTG
AGATTGGGGC ATGTAGCCAG AATGCTGGTT ACCACACAGC TGACCATTGC AGAAATTGCT
TATCACTGCG GCTTTAATAA TATGGCCAAT TTTAATAAAC TATTCAAAAG ACATAAGGGC
TGTACGCCGA AGGAATATAG GAGCAATTAT AATAGGCAAA TGAGTGGAGG AAATTAG
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| Protein sequence | MLNDTILQKK VLREITSLGV HDCCSIFFRH KRQFAFPLHT HEELELNLVL GGAGIQRIIG
DHIGHIGHAE LVLVGPNLPH GWFTLDDREE DILEVTLQFR KELFTEGFLN TELLHAIRKL
LDNAGRGILF TPDVAERVYE KLLALDKMSG FDSFIGLLSL LHELSVAKDT TLLSSVSFSR
EEIVSESRQL EQAFEYMNRH YGNPIALTAI AKVVHMSEAS FSRFMKAQTG LTFTENLVEL
RLGHVARMLV TTQLTIAEIA YHCGFNNMAN FNKLFKRHKG CTPKEYRSNY NRQMSGGN
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