Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5379 |
Symbol | |
ID | 8361556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6880181 |
End bp | 6881068 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644967526 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003125010 |
Protein GI | 256424357 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATAC TGAATACGAC TCAAAAAGTA CCTATTTATT CACTGAACCC GGACAAAACA GGTGATAAAC ACTTTAAGGT GTATCACTAT GAAGGTGGCC TGCCTGATCA GACCGACCTG CTGGTGCCAC ACCGCAAAAG TCACTATCTG CTCGTTTTTA TAAGAAAGGC TGATAGTCGC CAGTGGATAG ATATGACGCC TTACGAAGTA AAGAACAACA CCGTCTACTT CAGCGGTCCC GATAACATGA TCGTAAAAGA AGGATTCAGT GAACTATGGA GTACCGGTAT CGCTTTTACA CCGGAATTCC TGTCTTCCCA GGACAATGCC TCCCTGAATA ATCTTCCCAT CATCCGCAAT CCTTATAATG GTCACGAACT GGCGCTGACA GCACCCGATA TATTATTTAT AGAAGAGATC ATCAGTAAGA TCCGGCTGGA ATATGAACAA TCCGGAGAAT GGCAACAACG TATGTTAGCG GCTTATCTGA CGGTATTGCT GACCTATCTG AGCCGCCTGT ATACAGAACA GTACAAGGGG AAAGATACCT CCACAGAAAG ACAATTATTA AAGCAGTTCC AGGCGAAGAT CAACGGGTAC TTCCAGCAAT ACCATGAAGT TGCGGACTAT GCTGCCATGC TACACATCTC TGCCGGGCAT TTAAGCGAAG TGATCAAAAA TCAGAGCGGT AAACCCGCTA TCAAACACAT ACACGAACGC CTTGTAATGG AAGCCAGAAG ACTGCTCTTT CACACCAATA ACTCACTCAA GGATATCGCC TTTGACCTGG GTTTCTCTGA TGCCTCCTAC TTCAACCGCT TCTTTAAAAG AGAAACAGGG GTAACCCCAG CCGGCTTCCG GACAGAAATC CGCAAAATGT ACCATTAA
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Protein sequence | MQILNTTQKV PIYSLNPDKT GDKHFKVYHY EGGLPDQTDL LVPHRKSHYL LVFIRKADSR QWIDMTPYEV KNNTVYFSGP DNMIVKEGFS ELWSTGIAFT PEFLSSQDNA SLNNLPIIRN PYNGHELALT APDILFIEEI ISKIRLEYEQ SGEWQQRMLA AYLTVLLTYL SRLYTEQYKG KDTSTERQLL KQFQAKINGY FQQYHEVADY AAMLHISAGH LSEVIKNQSG KPAIKHIHER LVMEARRLLF HTNNSLKDIA FDLGFSDASY FNRFFKRETG VTPAGFRTEI RKMYH
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