Gene Cpin_5372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5372 
Symbol 
ID8361549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6873326 
End bp6873772 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content45% 
IMG OID644967520 
Producthypothetical protein 
Protein accessionYP_003125004 
Protein GI256424351 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAGAA GAACGGTTCT TGAGACTATC CGTCTCTTGT TCATTCTATT GTTCGTTTAC 
ACAGCCGTCA GCAAATTCCG CGATTATGAA AACTTCCGTG CAGTAATAGG CCAATCTCCA
TTATTAACCG GGTTTGCCCC CGTATTAGCT ATAGTGGTGC CTGTAGCAGA AATCATTATT
GCACTGCTCC TGGTCCTTCC ACGATACAGG CGTACCGGTC TCTATGCATC CTTTGCGATG
ATGATGCTGT TTACAACTTA CATAATTGTG CTCATGACAC TAGCCGAAAA GATCCCCTGC
TCCTGCGGAG GTGTCATTTC CCGTATGACA TGGACACAAC ACCTTTATTT CAATATTTTC
TTTGTGCTGC TTGCGTTCCT GGGTATGTGG CTATACTCCA GACCTGACGA TAACATCCGC
CCATCCAAAC AACTCGTTCA CGTATAA
 
Protein sequence
MLRRTVLETI RLLFILLFVY TAVSKFRDYE NFRAVIGQSP LLTGFAPVLA IVVPVAEIII 
ALLLVLPRYR RTGLYASFAM MMLFTTYIIV LMTLAEKIPC SCGGVISRMT WTQHLYFNIF
FVLLAFLGMW LYSRPDDNIR PSKQLVHV