Gene Cpin_5369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5369 
Symbol 
ID8361546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6870986 
End bp6871804 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content47% 
IMG OID644967517 
Productprotein of unknown function DUF159 
Protein accessionYP_003125001 
Protein GI256424348 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAGAA GTATCTCTAT GCATTGTGAA ATAGAATTGA CTATTGACGC CTTTCCGGAA 
CTGGAAAACG ACAAGCAGGT TGTATTCGAT AAAGAGGGAC TTGTTTATAT TGATTCCACG
TCATTTCCGC TGGCGGATGT TATTTCCCGG CAACAGGACA GGATGGTCCT TTCCGAGATG
GCCTGGGGAG TGGTACCATT GTTTGAGAAG GACAGAGATA AGGTAGTGTC GAGAAGACTG
GACATGGTGA ATGCCCGTGC GGAAAGAATA CTGGATGAAA ATTCTTTCTG GTATAAATCA
GGGCTGGTCA GACAGCCTGC GTTAATACCC GTTACCAGTA TTTTTGAATA CCGGCATATT
CACGGATGGA ATAATAAGGT ACCGTATGCA GTTCGGACGA ATCATCAGCC CGAGCAGCAT
CCATTTTATG TTCCCGGTAT GTATCAACTA CACCATGAGC ACGATGCGAA GGGACAGTTG
GTGCAGGTAG GCAGTTTTAC GATGGTCACC ACGGAGGCGA ATGAAGTGAT GCGACAGATC
CATAATGGTG GGAACAACCC GCATCGGATG CCTTTGTTTT TACCCCTTGA TATGGGCAAA
CAATGGATCT CTTCCAGCAG GACGAAGGGA GATGTAAAAG AAATCCTGCA ATACCGGTTG
CCGGCTGACC AGTTGAGTTA TCATACCGTG TTTACCCTGA GTGGCAAGAA AAGTCGTCCG
GATGGCAAGG CAAAGGATGC TTATTGGGAA TGGCCGAATC TTCCTGAACT GGGGAATGAC
TATCCCAAGG GGAGTGCTAT GCAGACGTCT TTGTTTTAA
 
Protein sequence
MCRSISMHCE IELTIDAFPE LENDKQVVFD KEGLVYIDST SFPLADVISR QQDRMVLSEM 
AWGVVPLFEK DRDKVVSRRL DMVNARAERI LDENSFWYKS GLVRQPALIP VTSIFEYRHI
HGWNNKVPYA VRTNHQPEQH PFYVPGMYQL HHEHDAKGQL VQVGSFTMVT TEANEVMRQI
HNGGNNPHRM PLFLPLDMGK QWISSSRTKG DVKEILQYRL PADQLSYHTV FTLSGKKSRP
DGKAKDAYWE WPNLPELGND YPKGSAMQTS LF