| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5365 |
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| Symbol | |
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| ID | 8361542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6853392 |
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| End bp | 6856658 |
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| Gene Length | 3267 bp |
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| Protein Length | 1088 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967513 |
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| Product | WGR domain protein |
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| Protein accession | YP_003124997 |
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| Protein GI | 256424344 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.359865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCAGT ATTTCGAATT ACAGGATGGG ACATCCTCAA AGTTCTGGCA AATTTCATTA
ACTGCCCACA CCATTGCCAC CCGATACGGT AAGATCGGTA CCCATGGAAA GACCACAACA
AAAGATTTTG ATGACCCCGC AAAAGCCCGG CAGGAATATG ACAAACTTGT CAAAGAGAAG
ACCGGAAAAG GCTACATAGA GATCATAAAA GACAGTAAAG CCCTGACTCC CGGTGATTTT
TATATTATTT CCGAAAAGGA GGCGGTAGAA CGCTTTCAGC TTAATCAGTA CATTAACGGT
CTGTATGATG ACGGCGGAAA GTATATGGTA TACGACGGCG ATGTCACCTT TGACAGCATG
TTGGATACCT ATAAATTTTG CATTGCCGCG AAAGACGACA TATATGGTAT CATCGTGGAT
GGTAATCTTA CCGTCAATGG TGTATTATTC CAGCCGGATA TTGATAATGG TGAACATCTG
CTGGTTACCG GCAATGTACA GGTAAAAAGC ATCAACAAAG GTGGTGGAGA ATTTTATGTC
AAAGGCGACC TCCTGGCAGA ACAAACCATT TATGGTTATT ATAACCATGG TGAATTGACG
GTGGAAGGTC GTACGCAGGC AACAGCCATC TTCGCAGATG ATCATTCGTT TACATTCAAG
GGTGGCGTAT CCGGAACAAT TGTCGGCGAT CATGAAATAG AAGGTATAGA CGGTGGATAT
AGTGATATCA CTGTATTGCG GCCCGAATTG GTGAAGGAGA AGGAATATGC CGACAGCGAT
AAGGTTGGTA AATACATTAA CAAAGGACAG CACATCCTGA GAGATGAGTT TTTACCTGGT
TTCAAAGCGG CTGCAGGCGC TTCTCCTAAA GAAGCCGTAG CTTCCGTTCA GCCGGAGATA
CTGACTGCTG CTGAAGCAAA GGAAAAGTTT GATTTCAGTA GCTACGATCC TATCGGCGTT
ATTGATTTTA ATCTCGTATT ATACTTTGAA AACGGACTGA CGATAGATGG AGATCTGAAT
GCAGATCTGG CCAGGAAAAT GCTGGAAGAC CAGGAAGAAC CTGCTGAGAT TGCAGACCTG
CTGGTATTCG TAAATGGTAA CCTGACAGTA AAAGGAGATA TCTCACTGGG TGAAGAAAGT
TTCCCTTGTT TGTTTGTATG CGGAAATGTG AAATGTGACG TACTCTATAG TGGCAGTGAG
TTTATTCATA TCACAGGTAA TGCGGATATC AAGTATGCGT TAGACGGTAA CTATAATGAT
GGTGCTATCA CTATCGAGGG AATTACCAGT GTGCCGTATG TTCTGAATTC AGACCATGAT
ACGAATATCA CGCCCAAAGA CGCTGTTTTA ATCAATTACT TCGGTGATTC GGATGACTTC
TTCATGTATG ACTATACTGA AAAGGATTTT GAAGAAGTAA TGGCTGCAGG AACTTTCAAG
AACAAGGAAT TTGACAGGCA TGCATTTATT GACATGCTGA AGGCAAAGAA GTCTCCGATG
AAAAAAGGCA TACAGGTCGG CCGGCTGCTT GTAATGGAGG AGTTGGCGCT GCGAAAGGCG
AAGCCTGAAA CTGTTCAGGT GCTTGATTTG AGTAATAAAT CCCTGAGTAA GTTCCCGAGG
ATTCTGACAA GTTTCAGTGC GCTGAAAAAG CTGACATTAA GTGGAAACAG TATAAAGGAG
ATCCCTGTGG AGATAGCTGC GCTTGAACAA CTGGAAGAAT TACATCTTTC AGGATGTGCA
TTGGAAACAC TGCCCCTGGA ACTGGCGCAG CTGAAGCAGC TACGGGTACT GGATGTTTCT
AAGAATAAGG ACTTGAAGAT ACCGGAGGGC TTTAGCCAAT CGGAATCACT GCGTGTATTA
GATGTAAGTA AATGTATCGG TTTCGGATTA ACAGCCGGTA TCCCTGCACT GGAAGAGCTA
CGCTGTGATA AATGCACAGA GGTTAGTCCG GTTGATTTTC CTGCGGCTAT TCTGGGATGT
ACAGGTCTGA AACGCCTGTC CATGAACCAG AATTCAATTA AACAGATTCC GGCTGCGCTT
ACAACATTGA AACAGCTGGA AGAACTGTAC CTGGACAGTG CGTTGTCTTA TATCAGTGAA
CTCCCGGATC TGTCGGGACT GACTAAACTA AGGGTCTTAC ATGCCTCAGG AATATATAAT
GATGCCAGTT CTCCATTGGT CAAACAGGAG CTGTTGAAAA GTTTCTTTAA GATTACTTCC
CTGGAAGAAT TGAGGCTGGA TCTTTATCGG AGATGGTTGC AGGATCTCGA CGAGGATGAT
TTTGAGGGCA TCGCAAAAAA TCTTGCGCAT GATCCGGTAA GATTACAGGA GATAAGGGAC
CTGCAGGCTA GTAAAGCAGA TTATGGTAAT GGAAAAATGG TCGGTCATCT GAGGAAACCA
ATGACAGCTG AACACCTGGA AGGAATTGGA GCATTGCAGC AGTTGCGTAT ACTTGATTTG
AGTGACAACA TGTTGTCCGA ATTACCGGAG GAGTTGTATG GTCTACCTAA ACTTCGTTCG
CTGAGTCTGA AAGGGAATTC TTTCACGATT GACGATCGGT TGAAGATAGC AGAAAGATTA
CCGGAAGTTG ATCTGGATGT AAGGGAGAAT TGGGTACCAG ATGAAGTCAT AGATACGCCA
ACAGCTAAAT CATGGAAAGA GGTGGCCGAT CTTATTGAAG CAGGTAATGA ACTGTGGTTC
AACTATGCAG GAGAGCCACT GAATGCGATA AAGAAATACG ACGAGGCCCT GGAATACTTT
AATACGGGTA AGGTGAAAGA CAAGTACCTG TTCCTGTATC TGCACTATGT GAAAACGAAT
GCGTATAGCA ATATCGCCAG TGATGATGAC TATGACGAGA TGTCTGAAGA AGATAAAAAA
AAGGTGCGAC TGGCTTGTAT CGAGACGGGG CTGAAAGGAC TGTCCCTGAT TCCAAAAGAG
ATGCTGCCGG CTACCAGTAT GGGTAAATTT TATAAAGAGG CGATCCGTAT TATGGGCAAC
GCTGTAGCCT GGGACATGCT TGAGACATAT GAGGATGCCG CGAAAATGGA AGAAGCCCTG
CTGCTTATCA ATCAGGCAGC TGCCTGGGTA CAGGATAAGA GCGAATACTT TATCTATGAT
ACGAAGATCA GGATACTATT ACGTCTCGGT AGAAAAGAAG AAGCCTGGCA GTTGGTGAAG
AAAACGTTGG AAGAGAACAA ATCTTACACC GATTTGAAAG ATATAGAAGA TAGCAAAGAG
TATAAACAGT GGTTGAAGAA ACAGTAA
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| Protein sequence | MLQYFELQDG TSSKFWQISL TAHTIATRYG KIGTHGKTTT KDFDDPAKAR QEYDKLVKEK
TGKGYIEIIK DSKALTPGDF YIISEKEAVE RFQLNQYING LYDDGGKYMV YDGDVTFDSM
LDTYKFCIAA KDDIYGIIVD GNLTVNGVLF QPDIDNGEHL LVTGNVQVKS INKGGGEFYV
KGDLLAEQTI YGYYNHGELT VEGRTQATAI FADDHSFTFK GGVSGTIVGD HEIEGIDGGY
SDITVLRPEL VKEKEYADSD KVGKYINKGQ HILRDEFLPG FKAAAGASPK EAVASVQPEI
LTAAEAKEKF DFSSYDPIGV IDFNLVLYFE NGLTIDGDLN ADLARKMLED QEEPAEIADL
LVFVNGNLTV KGDISLGEES FPCLFVCGNV KCDVLYSGSE FIHITGNADI KYALDGNYND
GAITIEGITS VPYVLNSDHD TNITPKDAVL INYFGDSDDF FMYDYTEKDF EEVMAAGTFK
NKEFDRHAFI DMLKAKKSPM KKGIQVGRLL VMEELALRKA KPETVQVLDL SNKSLSKFPR
ILTSFSALKK LTLSGNSIKE IPVEIAALEQ LEELHLSGCA LETLPLELAQ LKQLRVLDVS
KNKDLKIPEG FSQSESLRVL DVSKCIGFGL TAGIPALEEL RCDKCTEVSP VDFPAAILGC
TGLKRLSMNQ NSIKQIPAAL TTLKQLEELY LDSALSYISE LPDLSGLTKL RVLHASGIYN
DASSPLVKQE LLKSFFKITS LEELRLDLYR RWLQDLDEDD FEGIAKNLAH DPVRLQEIRD
LQASKADYGN GKMVGHLRKP MTAEHLEGIG ALQQLRILDL SDNMLSELPE ELYGLPKLRS
LSLKGNSFTI DDRLKIAERL PEVDLDVREN WVPDEVIDTP TAKSWKEVAD LIEAGNELWF
NYAGEPLNAI KKYDEALEYF NTGKVKDKYL FLYLHYVKTN AYSNIASDDD YDEMSEEDKK
KVRLACIETG LKGLSLIPKE MLPATSMGKF YKEAIRIMGN AVAWDMLETY EDAAKMEEAL
LLINQAAAWV QDKSEYFIYD TKIRILLRLG RKEEAWQLVK KTLEENKSYT DLKDIEDSKE
YKQWLKKQ
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