| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5363 |
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| Symbol | |
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| ID | 8361540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6850990 |
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| End bp | 6852813 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967511 |
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| Product | ATP-dependent transcriptional regulator, MalT- like, LuxR family |
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| Protein accession | YP_003124995 |
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| Protein GI | 256424342 |
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| COG category | [K] Transcription |
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| COG ID | [COG2909] ATP-dependent transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.423746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGAG AACTCATAAC CATATCGCTA CTGCTCATCA TTAGCCCCTT TACGTTTGCT
CAGCAAGGAT ATATTGACTC CCTGGAAGCA AAACTCAAGC GGGAAGAACT GTCTGATTAC
GAAAAGACCG TTATCCGATG TAAACTGACA AGGGCACTGT TTGAGACAAA CCTGGAAAAA
GCGATCCAGC TCACAAATAA TGCCGCCGAT GCCCCCGGAG CAGACGCAAA AGCATGGCTC
TACGCTACCA GGATCCATCT GCTGGTCCAA CGAAAGGATA AACCCGGCGC TTACGCAGCA
ATGGATAGCG CCATGCGCTA TGTAAATACC GCAAAGGATC CTATCGCCAA AGGGATGGTC
TGGTTCAGAA GCGGCTGGCT GGATCTGATT GATAATGAAA ATGATGAAGC GGTAACGAAG
TTCCTGAAGG CACTGGACTA CTTTAAAGGA AAAGACGGGA TAGCCTATAG CGCTATCACT
TGTCATTACC TGGCCAGTAT ATACAGCTAT GGTACGGACC CCGCCCGCCA GGGAGAATAT
GCCCGACGCA GTTATACCCT GGCATTGCAA AACGGCGAAG CGGATGTACT GAATACTGGC
TATTATACAA TAGGACAATA CTATTATGAT CTATTTAAAC TGAATCCCAA ACAACAGCCA
CTACTGGATA CTGCTCTGTC TTTTTACAGG CAGGCTATTG ACCTGAATAA ACGGGATCCG
GCACATATAC TCGTAAAAAG CAACACAGCC GGTATTGCCC TCAATCTGGC AAATATCTAC
TTCCAGCATT ACCCCGTTTC CTACCGGGAC AGCGTATATC ATTATCTGGA CCTGGCAGAA
AATGTTACTT CGGCCAGCGG ACTCACCGAA ATACTGGTAA ACTGTTATGG TATGCGCAGT
GAATATGAAC TGCTGAACAA CAATCCCGCC GAAGCGGAAC TCATTCTGCT GACGGCCCTG
GCCCGTACAG AAACTTCACC CATCAAGATG CCTCTTACCC AGTCACGCAT TTACAATGCC
CTGGCCAGAG TGGCTGAGAA ACAGGGAGAT ACGAAAAAAG CACTGGGTTA CATGAAAAGT
TTTGTGGCAG CTAACGAAAA AGCCTTCAAC CAGGAAAAGA TTAACAATAC CCAACGTATA
GAGGCACGTT ACCGGGCAGC GCAACAGCAA CAAAAAATAG TCCTGCTGGA ACAGGAGGCT
GCCTTCCGGG GTAAACGGAA CCTGTTATAC ATCGGATTAG GTATCGCAGG ATTCCTCGCC
CTTACCTTAC TCCTGGTATC CTACAACTAC CGTCTGAAAG CATCTATCCG CAAACAGGCA
CTGATAGACA AGGAAAAAGA AGAAGTCATT CTGAAGGTAA AACTGAAAGA AGCGGAGGCC
AATCAGCTGA TCACCGAACA GACCCTCCTG CGGGAACGAC AGGAAAGACT GGAAAAAGAA
CTGCTGGCCG AACAACTGCA AAAACAGGAG AAAAATCAGC TGATGGAAAT GCTGGCCGAT
AAATCTACCG CCGGCAACGA TCAGATTAAG AAACTACTGA AACGCCAGCA GCAGCTGGAC
GAAGAATATG AAGGCCATAA AACGGATTTC GTAGAAGTAC ATGCTGCCTT CTTTGAACAA
TTACAGCAAC ACGCAGGCGA TTCCCTGACA AGACTGGACA TGAAATACTG TTCCTATATA
TTGATGGGAC TTTCTAATAA AGAGATCTCC AATCGCTTAA ATATTGAAGC AAAAAGTATT
CGTATGGCTC GCTACAGGAT CAAACAAAAA CTGGGCTTAG GTAAAGACGA TAATCTGGAC
AATTTCATCA GAACATTGGG ATAA
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| Protein sequence | MLRELITISL LLIISPFTFA QQGYIDSLEA KLKREELSDY EKTVIRCKLT RALFETNLEK
AIQLTNNAAD APGADAKAWL YATRIHLLVQ RKDKPGAYAA MDSAMRYVNT AKDPIAKGMV
WFRSGWLDLI DNENDEAVTK FLKALDYFKG KDGIAYSAIT CHYLASIYSY GTDPARQGEY
ARRSYTLALQ NGEADVLNTG YYTIGQYYYD LFKLNPKQQP LLDTALSFYR QAIDLNKRDP
AHILVKSNTA GIALNLANIY FQHYPVSYRD SVYHYLDLAE NVTSASGLTE ILVNCYGMRS
EYELLNNNPA EAELILLTAL ARTETSPIKM PLTQSRIYNA LARVAEKQGD TKKALGYMKS
FVAANEKAFN QEKINNTQRI EARYRAAQQQ QKIVLLEQEA AFRGKRNLLY IGLGIAGFLA
LTLLLVSYNY RLKASIRKQA LIDKEKEEVI LKVKLKEAEA NQLITEQTLL RERQERLEKE
LLAEQLQKQE KNQLMEMLAD KSTAGNDQIK KLLKRQQQLD EEYEGHKTDF VEVHAAFFEQ
LQQHAGDSLT RLDMKYCSYI LMGLSNKEIS NRLNIEAKSI RMARYRIKQK LGLGKDDNLD
NFIRTLG
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