| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5361 |
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| Symbol | |
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| ID | 8361538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6848914 |
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| End bp | 6850347 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967509 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003124993 |
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| Protein GI | 256424340 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAAAT TCAGGATAAA CAGGAGTATC GGTGTGTTGG GGGCTTGTCT GGCAGTAGCC
AGTTGCGGAG TGCCGAAAGT AGCGACGCCA ACCGAAAATA AATCGGTTCC GGTCGCCTAT
AACGGAAACC AGGATACCAC CAATACTGCT TTGGTACAAT GGCGTGAATT CTTTAAAGAT
AAAAACCTGG TAAACCTGAT CGACACAGCA CTGAAAAACA ACCAGGAGCT GATGATCACT
TTACAGGAAA TAGAGATTGC CAGAAACGAT ATCAGGTCGA GAAAGGCACA GTTACTGCCA
ACAGTAGGTG TAAGGGCGGG AGCAGGCGTT GAGAAAGTAG GACGTTATAC CAGCCAGGGT
GCCGGTGACG CAACTACGGA GATAGAGCCG GGAAAGGAAA TGCCTGATCC CCTGCCCGAT
TTTATGATCG GCGCCTATGC CAACTGGGAA GCAGACATCT GGAGCAAACT GCACAATTCT
AAAAAAGCAG CAGTTACCCG TTACCTGGCA AGCGTAGAAG GCAGAAACTT CGTACTGACC
AACCTGATCG CAGAAATCGC CAATTCTTAT TATGAACTCC TGGCGCTGGA CAACCAGCTT
GAGATCATCA GACAGAACAT CGAACTGCAA AAGAACGGGC TGGAAATCGT AAAGGTGCAG
AAAGAGGCAA GCAGAGCGAC AGAACTGGCG GTGAAGAAAT TCGAAGCAGA AGTACTGAAA
TCTCAGAGCC TGGAGTATGA TGTCCTTCAG CAGGTCAAAG AAACAGAAAA CAGGATTAAC
TTCCTGCTGG GTCGCTATCC ACAGGAAATC GCCAGGGATA AAGGCAACTT CGTGGATGTT
CTGCCAGCTA TGGTAAATAC CGGCATCCCT TCACAACTGC TGGCCAACCG TCCTGATATC
AAACAGGCAG AACTGGAACT GACAGCGGCA AAACTGGATG TAAAGGTGGC CCGTGCAGAG
TTCTACCCTT CCCTGGGGAT ATCTGCAGGT GTGGGCTTCA ATGCCTTCAA ACCTTCCTAC
CTGTTCAAGA TGCCGGAATC CCTGCTGTAT TCACTGGCAG GCGATATCGT CGCTCCGCTG
ATCAACAGGA ATGCGATCAA GGCTGAGTTC AGCAGTGCCA ACGCAAGACA GCTACAGGCA
TTGTATAACT ACGAGCGGAC CATCCTGAAC GCCTATGTGG AAGTATCAAC GCAGCTCTCC
AATATTAATA ACCTGGAGAA AAGCTACGAT CTGAAATCCA AACAGGTAGA CGCACTGACC
AGGTCTATTG ACGTATCCAA CGACCTGTTC AAATCGGCCC GAGCTGATTA TTTAGAAGTA
CTGCTGACAC AGCGTGATGC ACTGGATGCC AAACTGGAAC TGGTGGAAAC TAAAAAATCA
CAACTGAATG CAGTGGTAAA TATCTATAGG AACTTAGGGG GTGGATGGAA ATAA
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| Protein sequence | MYKFRINRSI GVLGACLAVA SCGVPKVATP TENKSVPVAY NGNQDTTNTA LVQWREFFKD
KNLVNLIDTA LKNNQELMIT LQEIEIARND IRSRKAQLLP TVGVRAGAGV EKVGRYTSQG
AGDATTEIEP GKEMPDPLPD FMIGAYANWE ADIWSKLHNS KKAAVTRYLA SVEGRNFVLT
NLIAEIANSY YELLALDNQL EIIRQNIELQ KNGLEIVKVQ KEASRATELA VKKFEAEVLK
SQSLEYDVLQ QVKETENRIN FLLGRYPQEI ARDKGNFVDV LPAMVNTGIP SQLLANRPDI
KQAELELTAA KLDVKVARAE FYPSLGISAG VGFNAFKPSY LFKMPESLLY SLAGDIVAPL
INRNAIKAEF SSANARQLQA LYNYERTILN AYVEVSTQLS NINNLEKSYD LKSKQVDALT
RSIDVSNDLF KSARADYLEV LLTQRDALDA KLELVETKKS QLNAVVNIYR NLGGGWK
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