Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5356 |
Symbol | |
ID | 8361533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 6842771 |
End bp | 6843658 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644967504 |
Product | hypothetical protein |
Protein accession | YP_003124988 |
Protein GI | 256424335 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0885062 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.321432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAG TATTCCTTTC ACTATGCCTG GCCCTTTGTA TACCATTCGC CTTGTTTTCC CAATCAGCTA AAAATGAAAT CCCCTTTAGC TTATTACCTT CCGGCCACAT TCTCGTGAAA GCAAAAGTAG ACGGTCTGGA CGGTAACTTT ATCTTTGATA CCGGCGCAGG GATCACCGTA TTCACCAAAA CATTCTTTGA CAAACTGAAA CAGGTAACAC GGGAAGATGG TGGTTATACC GGCTTCAGAG CAACGGGAGA AAGACTGGAC ATTGCACTGT TCAGGGTAAA AAGCTTCGAA TTTGGCAGTC TGAAAAAGAC AGACGAAGAG ATCAGTTATG TAGATGCTAA TCTGGGTGGT ATCGATGGTA TCATTTCTCT GAAGCTGGTT GAATCCCTGC CATTTACCAT CGACTTTGAC AAAAAAGTGA TCCGTTTTGA ATCCGCCCAG ACCCTCGCTG ATATCAGAAA AAAGGCGAAG ACTGTTCCGG TACAACTGGA GCAATCCCGC GGGAAATCAC TCACAATATT CTCTTATTTT AAGATCAATG ATACCCTGAA CCTCCAACTG TCCCTGGATA GCGGAGCAGG AAAAGATGTA TTCAGACTGA ATGCAAAATA CCTTCAACAA CTGGGAGTGG ATATCAACGA CTCCCTCCAT GTAAAGCAAT TTGCAAAGAA AAGCGAGATT GACACCAACC ATGTATCACA CATCTATCTT ACTACTTTAA GCAGTATCGC TTCCGCAAAG GAACCTGCAG TAGGCAGAAA AGACTTTCCT GTACAATTTC TTGAGGGATT GATCTATGAC GGTATTATCT GGATCAACTG GTTTGGTCAG AAAATCACTT TTGACTTAGA TAAAAAAGTA TTGTTAGTAC AACGTTAA
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Protein sequence | MKSVFLSLCL ALCIPFALFS QSAKNEIPFS LLPSGHILVK AKVDGLDGNF IFDTGAGITV FTKTFFDKLK QVTREDGGYT GFRATGERLD IALFRVKSFE FGSLKKTDEE ISYVDANLGG IDGIISLKLV ESLPFTIDFD KKVIRFESAQ TLADIRKKAK TVPVQLEQSR GKSLTIFSYF KINDTLNLQL SLDSGAGKDV FRLNAKYLQQ LGVDINDSLH VKQFAKKSEI DTNHVSHIYL TTLSSIASAK EPAVGRKDFP VQFLEGLIYD GIIWINWFGQ KITFDLDKKV LLVQR
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