Gene Cpin_5356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5356 
Symbol 
ID8361533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6842771 
End bp6843658 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content42% 
IMG OID644967504 
Producthypothetical protein 
Protein accessionYP_003124988 
Protein GI256424335 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0885062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.321432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAG TATTCCTTTC ACTATGCCTG GCCCTTTGTA TACCATTCGC CTTGTTTTCC 
CAATCAGCTA AAAATGAAAT CCCCTTTAGC TTATTACCTT CCGGCCACAT TCTCGTGAAA
GCAAAAGTAG ACGGTCTGGA CGGTAACTTT ATCTTTGATA CCGGCGCAGG GATCACCGTA
TTCACCAAAA CATTCTTTGA CAAACTGAAA CAGGTAACAC GGGAAGATGG TGGTTATACC
GGCTTCAGAG CAACGGGAGA AAGACTGGAC ATTGCACTGT TCAGGGTAAA AAGCTTCGAA
TTTGGCAGTC TGAAAAAGAC AGACGAAGAG ATCAGTTATG TAGATGCTAA TCTGGGTGGT
ATCGATGGTA TCATTTCTCT GAAGCTGGTT GAATCCCTGC CATTTACCAT CGACTTTGAC
AAAAAAGTGA TCCGTTTTGA ATCCGCCCAG ACCCTCGCTG ATATCAGAAA AAAGGCGAAG
ACTGTTCCGG TACAACTGGA GCAATCCCGC GGGAAATCAC TCACAATATT CTCTTATTTT
AAGATCAATG ATACCCTGAA CCTCCAACTG TCCCTGGATA GCGGAGCAGG AAAAGATGTA
TTCAGACTGA ATGCAAAATA CCTTCAACAA CTGGGAGTGG ATATCAACGA CTCCCTCCAT
GTAAAGCAAT TTGCAAAGAA AAGCGAGATT GACACCAACC ATGTATCACA CATCTATCTT
ACTACTTTAA GCAGTATCGC TTCCGCAAAG GAACCTGCAG TAGGCAGAAA AGACTTTCCT
GTACAATTTC TTGAGGGATT GATCTATGAC GGTATTATCT GGATCAACTG GTTTGGTCAG
AAAATCACTT TTGACTTAGA TAAAAAAGTA TTGTTAGTAC AACGTTAA
 
Protein sequence
MKSVFLSLCL ALCIPFALFS QSAKNEIPFS LLPSGHILVK AKVDGLDGNF IFDTGAGITV 
FTKTFFDKLK QVTREDGGYT GFRATGERLD IALFRVKSFE FGSLKKTDEE ISYVDANLGG
IDGIISLKLV ESLPFTIDFD KKVIRFESAQ TLADIRKKAK TVPVQLEQSR GKSLTIFSYF
KINDTLNLQL SLDSGAGKDV FRLNAKYLQQ LGVDINDSLH VKQFAKKSEI DTNHVSHIYL
TTLSSIASAK EPAVGRKDFP VQFLEGLIYD GIIWINWFGQ KITFDLDKKV LLVQR