Gene Cpin_5350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5350 
Symbol 
ID8361527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand- 
Start bp6837367 
End bp6837984 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content43% 
IMG OID644967498 
ProductNUDIX hydrolase 
Protein accessionYP_003124982 
Protein GI256424329 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.46762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.101192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCGA TATTCGAACA TGCCAAAAGA CTAAAAGCCA TCAGCCATCT CGGACTTACT 
TATTCTAATA ATGAGTATGA CAGAGAGCGC TATGAAGAAT TGGAGACCAT CAGCCTGGAT 
ATTATGGAAC AACTCACAAA CGAGCCTGTA TCCAAACTAT CGCTGTATTT CTCAGATACC 
AAAGAATACA TCACGCCGAA AGTTGATATA CGCGTCGTCA TCTTTAATGA AAAAGAAGAG 
ATCCTGTTGG TCAAAGAAAA AGCAGACGGC CTATGGTCTT TGCCAGGTGG CTGGGCAGAT 
ATTGGTAGTT CACCAAGGGA GGTTGCTGTA AAAGAAGCTT TCGAAGAAAC AGGTCTGAGA 
GTAGAAACTG TTAAACTGCT CGCAGCAATG GATATGAAAT GCCATCCGCA TCCGCCGCAG 
TTGCATTATG CATACAAGAT ATTTATCCGT TGTAACGTTA TCGATGGTAC CTGGAATGAA 
GCGCATGATA TCCTGGATAA AGCATATTTT GCGCAGGATG CGCTGCCTCC GTTATCGTTA 
GAAAGGATCT TACCTCAACA GATCGATCTG ATGTTTGAGT TCCTGAGAAT GCCGGATAAA 
GAAACCGTGT TTGATTGA
 
Protein sequence
MQSIFEHAKR LKAISHLGLT YSNNEYDRER YEELETISLD IMEQLTNEPV SKLSLYFSDT 
KEYITPKVDI RVVIFNEKEE ILLVKEKADG LWSLPGGWAD IGSSPREVAV KEAFEETGLR 
VETVKLLAAM DMKCHPHPPQ LHYAYKIFIR CNVIDGTWNE AHDILDKAYF AQDALPPLSL 
ERILPQQIDL MFEFLRMPDK ETVFD