| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5344 |
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| Symbol | |
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| ID | 8361521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6827038 |
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| End bp | 6829023 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644967492 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_003124976 |
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| Protein GI | 256424323 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0371216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0467727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTAC TGGCTTTATC CCTGGGAGTT ACGTACCAGG CGTATAGTCA GACAGACAGT
GTAAGATTAA CAGGACTCGG TACGCCTGTA GCAGGCGATA CCCTCCGACT CAGTTACAAT
CCTGCCGGTG GTCCCCTGCA GGGAAAAGAA AAGATACAGG GGATCATCTA TCTCTTTAAC
AACTATCGCT GGGTAGTGGA TGATATTGCG CTTGTGAAAC ACAAAGGTAT ACTGGAAGGT
AAATATGGAG TACCGGCCAA CTGTGCCTTC GTTGCCATCA GGTTTGTAAC GGAAGAAAAT
GGCTACGTCG TATTAGCCGA TAATAACAAT GACTTTGGAT ATGTAGCGAC TACGGTAGAC
AAACAGGGCG CTAAACTCCC GGGTGGCGTA TTAGCCTGGG GCATCTTCCG TAAACCTTCC
ATCCACAAAG CGCCGGATGG ATATTTTGAT AAAAAGGATA TCAGTGATGA AGCACTGGAA
ATGTGGGTAA GAAAGGAGAT GGAGCAATAT CCGCAGAATA TGCCGAAGTA CTTTGACAGC
TATCTCACGA TGCTGAAGAT CAGCAAAGGC GACGAATTCC CTGTGGTAGC TCCCCGTAAC
CTGGAGAGAT TTGCCAGGCT GCCCGGCATT GATGAAAGTG GTTATCAGCT GATCTGGGAT
ACTTACCGGT TCGGGCTGAA AGACACACAA AAGGCAGACT CTGTAAAAAA AGTGATCACA
CAACTATATC CACATGGTCG TGTGATGCGT TTTGATAAAT ACTCGGCTGC CTTTTCGCGC
GATGCTGCTA CCGACCAGAA GATCGCTGAT ATGGAGGGTT TCCTCAAAGA ATTCCCGGTG
GCAGACTACC GCAAAGACTC CACAGCTACA CAGGGGTTCA TTTACCTGAA TGCCTATAGA
ACACTGGCCT CACTTTATTT TGATAAAGGC CAGTATGATA AACTGCTGGC AATGATCCCT
GACATGGATT TCGCCGCATT GAACGAGATC TATCATGCTA ATATCCACAA GGCTTTTTCG
CTGAAGCAAA TGCCGGTGGA CCAGCTTTAC CCGATCTCAA AAGCATTCAT CGATGCCATG
CTGCAGAAAC GTACAGACCT TTCCTACATG GATGGTACCC GCAATACACC AAGACAGGCT
ACGGAAAATG CCACCAGACA ACTGGACACT AAACTGGCAG TGCACATTCG CTTACTCGCT
AAAATGGGCA GATACAATGA AGCATCACCC TATCTGGCAC AGCTATCTGA GGCAGGTAAA
TACAGCAACG CCAATCTGAA TGAGACAAGA ATTGCTATAC TGGAAAATAC CGGCAATCAG
CAAATGGTAT TACCTACGCT GGAAATGGCC ATTAAAGTCA ATACCGCTAC ACCTGCGATG
ATCGAAAAGC TGAAGACATT GTACACAGAG AAGAACGGGC AGGCAACTGG TTTTGAGCAA
TACAGGGAGT CGCTGAAGTC TGCAGAAGAT ATTTCAAAGA CCAAAGCAGA GATCCAGGCA
AAACTGATCA ATGAAAAGAT TACGGCTTTC CGGCTGACGG ATATCAATGG TAAAACAGTG
AACTCCGCCG ACTGGAAAGA TAAGATCGTT GTAATAGACT TCTGGGCGAC CTGGTGCGGC
CCCTGTAAAA TGGCCTTTCC GGGTATGCAG ATGGCCGTAG ATAAATACGC AAACGATCCG
GCGGTAGGCT TCTATTTTAT CTCTACCATG GAAACGACAC AGGATTACAA ACAGAAGGTG
AAAGACTATA TCAAAACCTC CGGTTACCGG TTCAATGTAT TGTATGACGA ACAGACGGCT
AAAAATGGTG TCAACAATAA GGTATTCAAA AGTATGGCGC CTGTCTTCCA GTCATCTGCC
ATTCCAAGAA AAGCGATCAT CAAAAACGGT GTGATGCGCT ATACCGCAGA GGGATACCAG
GGTAGTCCAA GCAAACTGTA CGACGAACTG ACCTATGTTA TTGAACTATT AAAAGCGGAG
AACTAA
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| Protein sequence | MSVLALSLGV TYQAYSQTDS VRLTGLGTPV AGDTLRLSYN PAGGPLQGKE KIQGIIYLFN
NYRWVVDDIA LVKHKGILEG KYGVPANCAF VAIRFVTEEN GYVVLADNNN DFGYVATTVD
KQGAKLPGGV LAWGIFRKPS IHKAPDGYFD KKDISDEALE MWVRKEMEQY PQNMPKYFDS
YLTMLKISKG DEFPVVAPRN LERFARLPGI DESGYQLIWD TYRFGLKDTQ KADSVKKVIT
QLYPHGRVMR FDKYSAAFSR DAATDQKIAD MEGFLKEFPV ADYRKDSTAT QGFIYLNAYR
TLASLYFDKG QYDKLLAMIP DMDFAALNEI YHANIHKAFS LKQMPVDQLY PISKAFIDAM
LQKRTDLSYM DGTRNTPRQA TENATRQLDT KLAVHIRLLA KMGRYNEASP YLAQLSEAGK
YSNANLNETR IAILENTGNQ QMVLPTLEMA IKVNTATPAM IEKLKTLYTE KNGQATGFEQ
YRESLKSAED ISKTKAEIQA KLINEKITAF RLTDINGKTV NSADWKDKIV VIDFWATWCG
PCKMAFPGMQ MAVDKYANDP AVGFYFISTM ETTQDYKQKV KDYIKTSGYR FNVLYDEQTA
KNGVNNKVFK SMAPVFQSSA IPRKAIIKNG VMRYTAEGYQ GSPSKLYDEL TYVIELLKAE
N
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