| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5342 |
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| Symbol | |
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| ID | 8361519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 6821940 |
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| End bp | 6825551 |
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| Gene Length | 3612 bp |
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| Protein Length | 1203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967490 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003124974 |
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| Protein GI | 256424321 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0135995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0211304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAA GCAGGCGCCA TGGCAACCGG TTATCAACCA AAATCTTGTT AGTGATGAAA
CTAACCGCGC TATTATTGAC CATTGCATTC ATGGGGGCCA GTGCAAAAGG TGTCTCACAA
GCTGTTACAT TCTCCGGTAA AAATATTCCG CTGGAGAAAA CGTTCGAAAC CGTCCGCTCC
CAGACAGGCT ATCATGTGTT CTGCGACAGC CGCCTATTAA AAGAGGCGCT TCCCGTAAAT
GTCAATGCAG ACAATATGCC GCTGACCCAG TTCCTCGATA TCATCTTCAG GAATCAGTCA
CTGCAATACC TCATACGCGA ACAGACAATC TTCGTCAGCA AAAAAACAGC GACCAACGCG
GATCCGTCAA AAGTGCTGGA AACTGCTAAT GTAGTACTGG TACAGGGTAT CGTCACCGAC
GAAAATAAAA ATCCCTTATA TGGCGCTACC ATCAAGGTAA AAGGTACCGA ACGCTCCATC
ATCAACCAGC AGGATGGCCG CTTCGAAATA GCAGTCAACA TAGGTGATGT ACTCATCGTC
AGCTTTGTGG GTTTCCAGAC ACAGGAAGTG AAGATCTCCA ATAGCACCGA TCTCACCATC
GTATTAAAAC GCGCCACCAT CAACATCGAT GAGATCAACG TAAAAGTCTC CACCGGTTAT
CAGACGATCT CCAAAGAACG AGCAACCGGT GCCTATAACG TCATTACGGC CGACGAATTA
CAGGACGTTC CTGCCAATAA TATATTAGAA AGACTGGAAG GTAAAGTACC TGGTGTACGC
TTCGATATAC GTTTCAATAA AATACAGATC CGTACTATCA ACACCTATTC TATCAATACA
GCGCCGCTCA TCGTGATAGA CGGATTTCCG CTGATATCGG CATCTTCCGG TGATCAGAAC
CTGACTGCAC TGGGTAGCTC CCAGATGTCC AACGGTTCAG TATTATCTAC CCTCAATCCC
AACGACATTG AACAGATCAC CTTTCTGAAA GATGCCGTGG CCACCTCTAT ATGGGGTTCC
AGGGGTGCAA ACGGAGTGAT CGTGATTGAA ACAAAAAGAG GTAAAAAAGG GGCGCCTACG
CTTAACTTTT CTGCTACCAT AGGTACCTCC AAAGCACCTT CTTTCTCTAA GCTCCGATGG
ATGAACAGCG CCGAATATGT AGACCTGGAA AGAGAAATGT ATGACAAAGG TTTCTTTACT
GATAATACAC AATCTCCCTG GTACTTCCCC CTGCAGAACA ACAACCCGAG CGAAGTAATA
GAATGGCTTT TCAAAGTAAA ACGTGGCACC GCCACACAGG CAGAAGCAGA TGCTGCACTG
GCAGAGATCG GAACCAGAAA TAACCAGTCA CAGATACGGA AATACCTGCT GCGTTCAGCG
GTTAACCAGC AGTATAATCT GTCTGTATCG GGTGGCGGCG ATAACAACAC CTACTACATC
TCCGGCAACT TCAATAAAGA CCTGCCGATT TACCATGGTA ACAGTGCACA AAATGCGATT
ATCACCGGTA ACTTTACCAA TGACCTGTTT AACAAAACCG TCAAACTGAG AACAGGCTTC
AACTACCAAT ACGCCGTCAA TACTGCAAAC ATCGCAGCGG TGGAAGCTTT AAGCCAGTCC
CTCATATCCC TGCGTCCCTA CGATATGCTG GTGGATGGTA ATGGTCAGCC GATCAGACGT
AGCATTACCA TGCGTCCCGA AACGAATGAC AGTCTGGTAA AACTGGGTTA TCTGCCGTTT
ACCTACAGTG CCATCGATGA ACTGAACTAT TCCAATACCA AAAACAGCAT CAACTCCATT
CGCCTGAATA CCGGTCTGAA TGTAAAACTG ACAAACTGGA TGAACTTCGA TGTATCCGGT
ATGTACCAGC GCAACATTAA CAATATGCAG ACCATCAACG AAGTAAACAG TTACGCCGGC
AGAACCACTG TCAATACTGG AACTGTTATT TCGCCCACCA CGCATAAACC TGTATACAAT
GTTCCCTACG GCGGTACATA TACACTCACT GATGGCAACT CCTGGGACTA TAACCTGCGC
GGCATGCTGA ATGTCAATTA TGCGTTCAAT GCAGCGCATC AGCTGACAGC CATCGCCGGT
AGCGAGATCA GACAAACCTA TAGCAGGTCA TATAGTAGTA TCAGGTACGG TTATGATCCG
GATGCCAACA GCTTTGCTAC GGTGAACCCG ACCACACCAT TTATGACCAT GTACGGCTGG
GCCTCCACCC TCGGCAGCAA CCAGAGTGGT ATATCAGAAC AACGGAACCG TTATCTCTCC
TACTTCGGTA ATGCAGCCTA CACTTATAAA AACAGGTATA ACCTCAGCGG TAGTATGCGC
TTTGATGATT ATACCCTCCT CGGACTGGAA CGCAGCAAAC GTGCAAAACC ATTCTGGTCT
GCCGGTTTCA AATGGACCGC CACCGGAGAA GAATTCATGC AGTCCGTCAC CTGGATGACC
AACCTGGGTC TGCGCGTCAC CTATGGTACC GGTGGATCAG TACCATTAGG CGGCACCAAC
GTACCAATCA TTACGTTAAA TGCAACAGAT CCGAATACAC AGCTGCCAAT CGCTACCATT
CAAAATCCTG CAAACCAGCA ACTGGGATGG GAACTGACCC GTACCGGCAA CATCGGCATG
GATGCAGGCG TACTGAATAA TCGTATCTCA GGAAGTATTG ATGTATATCG CAAGAAAAGT
TCCGGTATCC TCGCCACCTT CCCCTTCAAT CCGACCTATG GATGGTCCAG CCTGTCTTAC
AATACCGGCA CCATGAAAAG CCATGGTATT GAAACAGGTA TCACTGCGAA GATCATAGAC
AAAAAAGACT GGGGTATTAC TTCTGTATTT AACTTCTCTT ATGGCAAAAC AGAAGTGACA
GATTCCCGAT TTAATACTAC GCTGGCTTCT ACCCTGGTAA TGAGCAGTAA CATGGTGAAT
GGCTATCCAA TGGGGGCCAT GTTTGTATAC CGCTCCGCAG GACTGAACCC GGAAACCGGA
CAAACACGCA TCTACGACAG GAATAACAAG ATCATCGAAA GCACCACCAA CCTGACATCT
GCCTTCGACA TCAACGACAT CAAATATGTG GGACAGTCAA CAGCACCTTA TCATGGTGGG
TTCTTTAACA CGTTCCGTTA TAAAGGCTTT GAACTGGACG TACAGATGAC CTATTACTTC
GGACATAAAT TCCTGGCCCC TTCGATCAAT AACTATCCGC AGTTCTCCGG CGAATACTAT
GGTATCGTAG GAAGACAAAA GGATCTGGCC AACAGATGGC GTAAACCGGG GGATGAAGCC
TTTACAGATG TACCAGGCCT GGGCAACGTC AACTTTAATA GTATTACCCG TTACCGCTAT
TCTGATAAAC TGGTACGCAG CGCAGATAAT ATCCGTTTAC AGCAGATCTC CCTGTCGTAT
AATTTCCCGA ACAGTATGCT GCCTAAACGC ATATTCAAAA GTCTGACCCT GAGTGGCAGT
GCACGTAACC TCGGCATGAT CTGGGCGAAG AACAAGGAAG GTTACGATCC TGAATACCTC
AACTCCAGCG CAAACTACTA TAGTATGCCG CCGGTAACCA GCTATCTGTT CAACATCAAT
GCTTCATTCT AA
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| Protein sequence | MPESRRHGNR LSTKILLVMK LTALLLTIAF MGASAKGVSQ AVTFSGKNIP LEKTFETVRS
QTGYHVFCDS RLLKEALPVN VNADNMPLTQ FLDIIFRNQS LQYLIREQTI FVSKKTATNA
DPSKVLETAN VVLVQGIVTD ENKNPLYGAT IKVKGTERSI INQQDGRFEI AVNIGDVLIV
SFVGFQTQEV KISNSTDLTI VLKRATINID EINVKVSTGY QTISKERATG AYNVITADEL
QDVPANNILE RLEGKVPGVR FDIRFNKIQI RTINTYSINT APLIVIDGFP LISASSGDQN
LTALGSSQMS NGSVLSTLNP NDIEQITFLK DAVATSIWGS RGANGVIVIE TKRGKKGAPT
LNFSATIGTS KAPSFSKLRW MNSAEYVDLE REMYDKGFFT DNTQSPWYFP LQNNNPSEVI
EWLFKVKRGT ATQAEADAAL AEIGTRNNQS QIRKYLLRSA VNQQYNLSVS GGGDNNTYYI
SGNFNKDLPI YHGNSAQNAI ITGNFTNDLF NKTVKLRTGF NYQYAVNTAN IAAVEALSQS
LISLRPYDML VDGNGQPIRR SITMRPETND SLVKLGYLPF TYSAIDELNY SNTKNSINSI
RLNTGLNVKL TNWMNFDVSG MYQRNINNMQ TINEVNSYAG RTTVNTGTVI SPTTHKPVYN
VPYGGTYTLT DGNSWDYNLR GMLNVNYAFN AAHQLTAIAG SEIRQTYSRS YSSIRYGYDP
DANSFATVNP TTPFMTMYGW ASTLGSNQSG ISEQRNRYLS YFGNAAYTYK NRYNLSGSMR
FDDYTLLGLE RSKRAKPFWS AGFKWTATGE EFMQSVTWMT NLGLRVTYGT GGSVPLGGTN
VPIITLNATD PNTQLPIATI QNPANQQLGW ELTRTGNIGM DAGVLNNRIS GSIDVYRKKS
SGILATFPFN PTYGWSSLSY NTGTMKSHGI ETGITAKIID KKDWGITSVF NFSYGKTEVT
DSRFNTTLAS TLVMSSNMVN GYPMGAMFVY RSAGLNPETG QTRIYDRNNK IIESTTNLTS
AFDINDIKYV GQSTAPYHGG FFNTFRYKGF ELDVQMTYYF GHKFLAPSIN NYPQFSGEYY
GIVGRQKDLA NRWRKPGDEA FTDVPGLGNV NFNSITRYRY SDKLVRSADN IRLQQISLSY
NFPNSMLPKR IFKSLTLSGS ARNLGMIWAK NKEGYDPEYL NSSANYYSMP PVTSYLFNIN
ASF
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