| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5336 |
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| Symbol | |
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| ID | 8361513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6815815 |
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| End bp | 6816858 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644967484 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003124968 |
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| Protein GI | 256424315 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.339163 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCCGC TCGTCAGGGA ACTGATACGC TATTGCTGGG TACTGGCTTC TATTTCGGCA
GCATCGGCGA TCATGTTTAT TATCGTCTTC AGACTGGGTA ATGGTGCAAT ATGGGGCGTC
GCGTTTATGA CAGGTATACG TTCGCTGATG GCGGGGTTTT CTAATGTCTG GATATTGGTG
ATGCTGAGAA AGTATTTTCC TTTCCAGACC AAGAAGCAGG AGCGCATCAC CAGGTATGTG
ACGGGATATC TGCTTACCTG TTGTTTATTT TCCCTGACCA TTCCCATGGA GGCTTACTTT
GATGCGGCAA AAGAACATTT TACTTTCCTG CAACGGCTGC CGGCAGTTTT GTTGCAAGGT
TTCTGGAATA GTTTGCTGGT AATTGTTACA CATAATCTCG TGATTCTACG TTTCGAAAAA
GAAAATATTG AACTGGAAAA TTCCCGTCTG AAAGCCGCCA ATCTTGAATC GGCCAATCTG
CTATTGAAAC AGCAGATACA TCCCCATTTC CTTTTCAACG CTCTGAGTAT GCTGAAAAGC
CTGTATAAGA CGGATATTCA GGCAGGAGAG GCTTATCTTT CGCACCTGGT AAATTTTCTG
CGGGCCTCAC TGGCAGAACC GCAATCCCGT GCTACCCGTT TATCTGACGA GATAAAGCTC
TGCAACGATT ATCTTGAAAT GCAGAAGATC CGTTTTGAAG ATGCGCTGCA TTGTACCATA
GATGTTCAGG AAAAGGTATT GTCAACCGGT TTTGTACCTG CATTTTCTCT TCAATCGCTG
ATAGAGAATG CTATCAAGCA CAATGAAGCA ACAGAGGCAT CTCCCTTGCA CATTACCATG
TACTACCAGG AGGGATGGAT CATTACGGAG AATAATCTGC AGGTCAGAAA ACATATTGAT
TCCCAGAGTG GTAAAGGGCT GATTAACCTG GTAGAAAGGT ACCGGATATT GTCAGGAGAT
GAGGTGATTA TCTCACAGGA TTTGCATACC TTTTCAGTCA GCATTAAAGT TTTGAGTAAT
GAAGGTAGTG ATCATAGAGG ATGA
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| Protein sequence | MSPLVRELIR YCWVLASISA ASAIMFIIVF RLGNGAIWGV AFMTGIRSLM AGFSNVWILV
MLRKYFPFQT KKQERITRYV TGYLLTCCLF SLTIPMEAYF DAAKEHFTFL QRLPAVLLQG
FWNSLLVIVT HNLVILRFEK ENIELENSRL KAANLESANL LLKQQIHPHF LFNALSMLKS
LYKTDIQAGE AYLSHLVNFL RASLAEPQSR ATRLSDEIKL CNDYLEMQKI RFEDALHCTI
DVQEKVLSTG FVPAFSLQSL IENAIKHNEA TEASPLHITM YYQEGWIITE NNLQVRKHID
SQSGKGLINL VERYRILSGD EVIISQDLHT FSVSIKVLSN EGSDHRG
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