Gene Cpin_5334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5334 
Symbol 
ID8361511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp6814110 
End bp6814682 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content45% 
IMG OID644967482 
Producthypothetical protein 
Protein accessionYP_003124966 
Protein GI256424313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.682845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACACG TAAAAGACAA CATCTTATTG AAAAATGTGT CCGGTACCAT CGGCAGACAA 
ATGAATATTT TCAACCGTTA TGGCGAGACG TATCTGAGGA CAGCAAAGAA GAAAAAACAG
CTGCATTTTT CCGCCATACA GCTGGAATCA CAGCATAATT TTGCGGATGC AGTAGTGTAT
TCAAAGCAGG TAATAAAAGA TCCGGAGATG AATTTGTATT ACCTGTCACT TGCGAGGAAA
GGACAGAGTG CGTATAATGT GGCGATGAAG GATGCGTTGA GCGCACCGGT GATCAGGGAT
ATAGATGCCG ATACCTATAC AGGCGAAAGC GGGCAGGTGA TCAGCATATA TGCGGTAGAT
CACTTCAGGG TTTATCAGGT ACATGTAGCG ATCATTAACG CTGCAGGAGA CACTATTGAA
AAAGGACTTG CCGTCCAGCA ATGGAAACCG ATGTATTGGG ATTACACGAC GACGATGCCT
ACGGAAATAG CGCAGGTAGA AAAGATACAG GTAATAGCAG TGGACATGCC GGGAAATCAG
ACAAAAGCGG TACTCACATT TACAGATGGA TAA
 
Protein sequence
MAHVKDNILL KNVSGTIGRQ MNIFNRYGET YLRTAKKKKQ LHFSAIQLES QHNFADAVVY 
SKQVIKDPEM NLYYLSLARK GQSAYNVAMK DALSAPVIRD IDADTYTGES GQVISIYAVD
HFRVYQVHVA IINAAGDTIE KGLAVQQWKP MYWDYTTTMP TEIAQVEKIQ VIAVDMPGNQ
TKAVLTFTDG