| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5331 |
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| Symbol | |
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| ID | 8361508 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6810424 |
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| End bp | 6812001 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967479 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003124963 |
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| Protein GI | 256424310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.797565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGTAA ATAAATTTAC GCGGGTAATC ATAGTCATTA CCACAATTTC AGCGGCTATC
ATGGAGCTCA TAGATACCTC TATTGTTAAC GTCGCACTCA ATAACATCAG CGGTAATCTT
GGCGCTACAC TGGAGGATAC TTCCTGGGTA GTAACAGCCT ACGCGATTGC AAACGTGATT
GTTATTCCGA TGACAGGCTT CCTCAGCCGC TACTTCGGGA GAAAGAACTA TTACCTTACT
TCTATTATCA TATTTACGCT GGCTTCCTAC ATGTGTGGTT CTTCCTCCTC CTTGTGGATG
CTGGTCTTCT GGCGGTTTAT ACAAGGTGTT GGCGGTGGTG CCCTGCTTTC TGTATCACAG
GGGATATTAT TCGATGCCTT CGATCCCTCT GAAAAGGGAA AAGCCTCAGG TATGTTCGGA
ATGGGTATCG TGATAGGACC AACAATAGGG CCGATACTCG GCGGCTACAT CGTCGATAAC
TATGCATGGC CGCTGATATT CGATATTAAT ATTCCGTTTG GTATTGTTGC TTGTTTGCTG
ACCTGGAAGT TCATCGATAA AAAAGAAAAT GAATACAACA TCGACCGTAA ATCCATTCCT
ATTGATTACA TCGGCGTGCT CTCCTTATCT GCGGGAATTG GCGCCTTGCA ATATATCCTG
GAGAAAGGGC AATCAGACGA CTGGTTTGAA GACAGCACGA TCCGTATTAT GACCGCAATA
GCGGTAGCCG GACTGGCGGC ATTTATCTGG TGGGAACTAA AGACAAAGAC GCCTATCATC
AATCTGAGGG TTCTGAAAAG CAGGAACCTT ATCGGGAGTA ATGTGCTCAC CTTTGTATGT
GGCTTCGGAT TGTTTGGCTC TGTATATCTG TTTCCGCTGA TGGTGCAGCG CGTCATGGGG
TATACGCCTA CAGAATCAGG ATTATCTATG ATACCCGGGG CATTAGTCAC GATCATGGTA
ATGCCTTTTA TCGGGGCTTC ACTGGGTAAA GGCGTATCGC CCATGTTCTT TGTCGTGACT
GGTTTCGGCT TGTTTATCCT CCATGGATAT ACCAGCGCAC AGGCAACACC TGACGCAGAT
AAATGGTGGT TTATGTATAC ACAGATCTTC CGCGGTGTAG GTACTGCCTG TCTGACGGTA
CCGTTGTTAA GTCAGGCGGT CGTCGGACTC AAACCACAGG ACATGCCTTA TGGTATATCA
CTCAATAACA TGTTCCGACA GATTGGTGGT GCATTCGGTA TCGCGATCAT GAATACGTAT
TCTACGCAGC GTTTTGCGGT ACACCGTTCT GACCTGGTAT CCAATCTGCA AGGGAATAAT
CCGTTGATGA ATGAAAGGGT AGCAGGTGTC GCCCAGGGCC TGATCAGTAA AGGTGTCAAC
CCCATCGCGG CTAATGCCCA TGGCGCCTGG TCTAACCTGG ATTATGCCAT TACCAGACAG
GCACAGATGC TTGCTTATCT CGATGGCTTC CTGTTGGTAA GTGTGTTTTT CGTCTGCACG
ATCCCATTCA TGTTACTGTT AAAAATAGAA AAGATGGATG CCGAAACACG CGCGAGAGTT
GCCGCAGAGG CGCATTGA
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| Protein sequence | MAVNKFTRVI IVITTISAAI MELIDTSIVN VALNNISGNL GATLEDTSWV VTAYAIANVI
VIPMTGFLSR YFGRKNYYLT SIIIFTLASY MCGSSSSLWM LVFWRFIQGV GGGALLSVSQ
GILFDAFDPS EKGKASGMFG MGIVIGPTIG PILGGYIVDN YAWPLIFDIN IPFGIVACLL
TWKFIDKKEN EYNIDRKSIP IDYIGVLSLS AGIGALQYIL EKGQSDDWFE DSTIRIMTAI
AVAGLAAFIW WELKTKTPII NLRVLKSRNL IGSNVLTFVC GFGLFGSVYL FPLMVQRVMG
YTPTESGLSM IPGALVTIMV MPFIGASLGK GVSPMFFVVT GFGLFILHGY TSAQATPDAD
KWWFMYTQIF RGVGTACLTV PLLSQAVVGL KPQDMPYGIS LNNMFRQIGG AFGIAIMNTY
STQRFAVHRS DLVSNLQGNN PLMNERVAGV AQGLISKGVN PIAANAHGAW SNLDYAITRQ
AQMLAYLDGF LLVSVFFVCT IPFMLLLKIE KMDAETRARV AAEAH
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