| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5329 |
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| Symbol | |
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| ID | 8361506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6806762 |
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| End bp | 6808969 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644967477 |
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| Product | ABC transporter related |
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| Protein accession | YP_003124961 |
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| Protein GI | 256424308 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.580332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAAT TCCTATTCCC CAGGAAATCC TTCCCTTTTT TCAGGCAGGC AGACGCAATG
GATTGCGGCC CTACCTGTCT GCAGATGATT GCTGCCTGGC ATGGGAAGAC CTATCCTTTA
CAATATTTAC GTCGTCAATG TAAAATATCC CGTCAAGGTG TCACTTTTGC CGATCTGATA
ACCGCAGGAG AGCAACTGGG TTTTAACACC CTTTCGGCTG AACTGCCTTT TACCGTGTTG
GCCGCAAAAG CCCCATTGCC CTGTATACTG CATTGGGACC GGCAGCATTT TGTTGTATTG
TACCGGCTGA CGGAACATAA AGTATATGTG GCAGATCCTG CATTAGGGCG CCGTATCCGT
TATACCATTC CGGAATTCAT GGAGGCCTGG CAACTGGCGG ATAAACCGGG ATTCGGAAGG
GCACTATTCC TGGAACCCAC AGCGGCATTT CATGCAGCCA CCGAAGTAAA AGCACCTGTT
ACTGATCTGC GTACCCTCTG GCCATATATC AGCAGTCACC GGCGAAAGTT AATTCCTGTA
GGTGTGAGTC TGCTGATAGC CGCCGTCTTG TCTTTTATAG TGCCATTACT GACAGAAGCG
ATTGTAGACC GGGGCATCAA TAAACAGGAT ATTCCCATCC TGTTACTGAT CTGTGCGGGG
CAGCTGTCAT TATTCCTCGG CAAACAGGTT ACTGATTTCT TCCGTGCCCG TTTGCTGCTG
ACACTAGGGG CACAGATGAG TATCATGATG CTGGAAGCAT TCCTCCTGAA ACTGATGCGC
TTACCTTTCT CCTTTTTTGA TAACAGGCAA TCAGGTGATA ATATGCAACG CGTCACAGAC
AATCAACGGG TAGAAGATTT TCTGACCACT TCCGCTGTTT CCTTTGTGAT GTCGGTCATG
ATCCTGCTGG TCATGGGAGG TACATTGCTG TATTATAACT GGCTTATTTT TATCCTGTTT
GCCATTGGCG CTGCTGTAGG TGTTTTGTGG ACAGGGGCTT TCGGAGAAAA ACGCGGACGT
CTGGACCAGA AGCGTTTCCG CGTACTGGCG GCGAACCAGG ACACGCTCCT GGAAATCTTT
TCCGCTTTCC AGGAGATCAA ACTCACAGGT AGCGAACGGC TTAAAATAAA TCAATGGACA
CGCCTGCAAC AACAGTCTTT TACCGTCAAA CTGGAAAGCC TGAAACTGGA TCAGTTTATA
CAGGGGATCG CATTGTTTAT CAATGAGACC CGCAATGTGA TCATCACCTG TTTTACAGCA
ATACTGGTGA TCAAAGGACA GCTGACACTG GGAGAAATGC TGGCTATCAC TTACATCTGC
GGACAACTCA ACGCGCCGGT AGCCCAGCTG GCCGAATTCA TAAGGGCCAT GCAAAATACG
AAGTTTAGTC TGCAACGTAT TGCAGAGGTT CATCATGAAC AGGATGAAGA CCCTCCGCAG
GAAAATACGA TCACAGAGGA TATGGGAGGG CGTGATCTGC ATCTCTCCGG TGTATACTTC
CAGTATGGCA ATAAACATTC TCCGCTTGTA CTGAATAATG TCAACCTAAG TATACCCGCT
GGTAAGATGA CGGCGATTGT GGGCATGAGC GGCAGTGGTA AGACAACATT GCTGAAACTA
TTGCTGCAAT TCTACGATCC GACACAGGGA ACCATCTTTG CGGGAGATCA GTCATTCACA
GCTATTACTG CGCAAGACTG GAGAAGCCAG TGTGGAGCCG TGATGCAGGA TGGCTATGTG
TTCCGGGATA CCATTGCCAA TAATGTATAT GGCGGTGAAG CAGACAGAGA TGTGGAGCGT
ATGATGAAAG CCTGCAGGAT GGCGAATATT CATGATTTCT TTGCAGCAAT GCCTTTCGGT
TATGATACCA TGATAGGAAA GGATGGTTAT GGGTTGAGTG AAGGACAGAC ACAACGGCTA
CTGATTGCAA GACTGATCTA TCGCGATCCC GCCTATATAT TCCTGGATGA AGCCACAAAT
TCACTGGATG CCAGTAATGA ACGGGCGATC ATCAATAATC TACATGAATA CTTCGTGGGA
AAAACAGTGG TGGTGGTAGC ACATCGCCTG AGTACGGTTA AACATGCAGA TCAGATCCTG
GTAATGGATA AAGGGATGAT CGTTGAAGCC GGTACACATG AAACGTTGAC CATAGCAGCC
GGCGCTTATT ATCGCCTGAT TAAAAACCAG CTGGAACTCG GCAGGTAA
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| Protein sequence | MFQFLFPRKS FPFFRQADAM DCGPTCLQMI AAWHGKTYPL QYLRRQCKIS RQGVTFADLI
TAGEQLGFNT LSAELPFTVL AAKAPLPCIL HWDRQHFVVL YRLTEHKVYV ADPALGRRIR
YTIPEFMEAW QLADKPGFGR ALFLEPTAAF HAATEVKAPV TDLRTLWPYI SSHRRKLIPV
GVSLLIAAVL SFIVPLLTEA IVDRGINKQD IPILLLICAG QLSLFLGKQV TDFFRARLLL
TLGAQMSIMM LEAFLLKLMR LPFSFFDNRQ SGDNMQRVTD NQRVEDFLTT SAVSFVMSVM
ILLVMGGTLL YYNWLIFILF AIGAAVGVLW TGAFGEKRGR LDQKRFRVLA ANQDTLLEIF
SAFQEIKLTG SERLKINQWT RLQQQSFTVK LESLKLDQFI QGIALFINET RNVIITCFTA
ILVIKGQLTL GEMLAITYIC GQLNAPVAQL AEFIRAMQNT KFSLQRIAEV HHEQDEDPPQ
ENTITEDMGG RDLHLSGVYF QYGNKHSPLV LNNVNLSIPA GKMTAIVGMS GSGKTTLLKL
LLQFYDPTQG TIFAGDQSFT AITAQDWRSQ CGAVMQDGYV FRDTIANNVY GGEADRDVER
MMKACRMANI HDFFAAMPFG YDTMIGKDGY GLSEGQTQRL LIARLIYRDP AYIFLDEATN
SLDASNERAI INNLHEYFVG KTVVVVAHRL STVKHADQIL VMDKGMIVEA GTHETLTIAA
GAYYRLIKNQ LELGR
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