Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5317 |
Symbol | |
ID | 8361494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 6791763 |
End bp | 6792635 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644967465 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003124949 |
Protein GI | 256424296 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.803525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGTA TAGACAAATA TGAAGGACTA TATGGCGACC GGGATGCTAA ACCCGATGCG GGATATATTT TTTCTGAACT GCTGGGTACA AGGAGCTGGA AGTTTGACTG GAATATCGAA CCTCATATAC ATCCGTCTAT CTACCAGTTG TTTTTCTTTG AGGAGGGGAA GCTGACTTTT TTTGAGGCGG ATAGTCAGCG GGAATTGCAG ACTCCCTGTA TGTTATTGAT CCCACCTATG GCACTACATG GATTCCGGTA TGAAACTGTC GCCGGCGGCA GGATATTGAC ATTGTCGGAT GTCATGCTGG ATACACTGTT TCCTGAGTCA GCATTACTGG CACCCATGCT GACAACAATA CGGTGTTTTG CTGACTTCAA TGGTCCTTAT TCCGCTGAAG ATATAGTAGC ATTGATAAAG GCAGTAGATA AAGAGTTGTT TGGTGATCTG CCCGAAAAAA AGGTGATGCT GCGTATCTGT TTACAGCAAT TGTTTTTGGC CGTGTATCGT TTATGGCAGG ACCAGCAGTC AGGCAATACC TTATCTGACA ATCATTCCCT GGGTTATTTC AGGAAGTTTC AACAGCGGAT ACGGGAAGAA GGTCTTAGGT ATACGATTGC ACAATTCGCA GCAGAACTGG GGATTACTAC CGTGCATCTT AATCGTATTT GCCGGGAGGT GGTGGGTAAG TCTGCCGGTC AGCTGGTACA CGATCATATT TTAGAAGAAG CGAAAAAGTA TCTGACTTAT ACTTCTTATA CCGTTTCAGA AATTGCCTAT CTGCTCAACT TTGAATATCC GAATTACTTT GCGAGGTTCT TTAGAAAGCA TGCAGGAGTT TCTCCGAAGG AGTTCAGAAC AATTAGGAAT TAG
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Protein sequence | MKRIDKYEGL YGDRDAKPDA GYIFSELLGT RSWKFDWNIE PHIHPSIYQL FFFEEGKLTF FEADSQRELQ TPCMLLIPPM ALHGFRYETV AGGRILTLSD VMLDTLFPES ALLAPMLTTI RCFADFNGPY SAEDIVALIK AVDKELFGDL PEKKVMLRIC LQQLFLAVYR LWQDQQSGNT LSDNHSLGYF RKFQQRIREE GLRYTIAQFA AELGITTVHL NRICREVVGK SAGQLVHDHI LEEAKKYLTY TSYTVSEIAY LLNFEYPNYF ARFFRKHAGV SPKEFRTIRN
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